Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00281 ATGAATGATAAGAAGGTGAGAAGTGGGTTGTGCGTGTGGCCAAATGTGAGACAACTTTGCTTTAGAAAAGGCATTCTGTATGGATTTATGCGATTGTTTTCTACGCCATTGAAAACGCTGCGTGGAGCTAGTCGAACGCTGAGGGTGGCTCAATTTTGCAGTGTTGCCAATATGTCTTCCTCGTTGCAGATTGAATTGGTACCTTGCCTAAAGGACAATTATTCGTATCTTTTACATGATGTGGATACGGGTACGGTTGGTGTTGTTGATCCTTCTGAAGCTGTGCCTATCATAGATGCCTTGAGCAGGAAAAATCGAAATTTGACATACATACTCAACACTCACCATCATCATGATCACACTGGTGGAAATGTAGAATTGAAAGCAAGATATGGGGCAAAGCTACTCCTTTGTATAGATGTTAACACTTCCCATGTTGCAATACAGGTGATTGGTTCAGGAACTGACAAGGAAAGGATTCCTGGAATTGATATCTTTTTGAATGATGGTGATAAGTGGATGTTTGCTGGCCATGAGGTGCGTGTAATGGACACACCTGGTCACACCCGAGGTCATATAAGCTTCTATTTTCCTGGATCTGGGGCAATTTTTACTGGAGACACTCTTTTCAGCTTATCATGTGGCAAGCTGTTTGAAGGAAGCCCACAGGAGATGATGTCTTCTCTTAAAAAGATCATGTCTCTGCCAGATGATACAAATATATACTGTGGTCACGAGTATACATTGAGCAATACAAAGTTTGCATTGTCCATTGAACCTGAAAACAAAGAACTTCAATCCTATGCTGCTCATGTAGCTTACCTTCGAAGTAAAGGCATGCCCACGATTCCCACCACACTGAAGATGGAAAAGGCTTGTAATCCATTCCTTCGTACATCCAGTGCTGCAATCCGGCAATCATTAAACATTGCAACCACAGCAAATGATGCAGAAGCCCTTGCTGTCATCCGGAGAACAAAGGACAATTTTTAG 993 0.423 MNDKKVRSGLCVWPNVRQLCFRKGILYGFMRLFSTPLKTLRGASRTLRVAQFCSVANMSSSLQIELVPCLKDNYSYLLHDVDTGTVGVVDPSEAVPIIDALSRKNRNLTYILNTHHHHDHTGGNVELKARYGAKLLLCIDVNTSHVAIQVIGSGTDKERIPGIDIFLNDGDKWMFAGHEVRVMDTPGHTRGHISFYFPGSGAIFTGDTLFSLSCGKLFEGSPQEMMSSLKKIMSLPDDTNIYCGHEYTLSNTKFALSIEPENKELQSYAAHVAYLRSKGMPTIPTTLKMEKACNPFLRTSSAAIRQSLNIATTANDAEALAVIRRTKDNF* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00281 330 NCBIfam hydroxyacylglutathione hydrolase 65 330 IPR017782 GO:0004416|GO:0019243
Lapu5g00281 330 PANTHER BETA LACTAMASE DOMAIN 56 330 - -
Lapu5g00281 330 SMART Lactamase_B_5a 72 245 IPR001279 -
Lapu5g00281 330 SUPERFAMILY Metallo-hydrolase/oxidoreductase 62 330 IPR036866 -
Lapu5g00281 330 CDD hydroxyacylglutathione_hydrolase_MBL-fold 67 245 IPR035680 -
Lapu5g00281 330 FunFam Hydroxyacylglutathione hydrolase, mitochondrial 62 330 - -
Lapu5g00281 330 Hamap Hydroxyacylglutathione hydrolase [gloB]. 62 330 IPR017782 GO:0004416|GO:0019243
Lapu5g00281 330 Pfam Hydroxyacylglutathione hydrolase C-terminus 246 330 IPR032282 -
Lapu5g00281 330 Pfam Metallo-beta-lactamase superfamily 75 245 IPR001279 -
Lapu5g00281 330 Gene3D - 62 330 IPR036866 -
Lapu5g00281 330 PIRSF Glx 57 330 IPR017782 GO:0004416|GO:0019243
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00281 Lapu-Chr5 2306585 2310739 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00281 K01069 - gmx:100819370 575.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00281 5 2306585 2310739 Lapu5g00281 5 2306585 2310739 ECH
Lapu5g00281 5 2306585 2310739 Lapu11g00683 11 9955710 9958914 PCT