Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00683 ATGCGATTATTTTCTATACCGTTAAAAACTTTGCGTGGAGCTAGTAGGTCGTTGAGAGTAGATCAATTTTGCAGTGTAGTGAATCTATCTTCCTCACTGCAGATTGAATTGGTTCCATGCCTTAGGGACAGTTATGCATATCTTTTACATGATGTGGATACGGGGACAGTTGGTGTTGTTGATCCTTCTGAAGCTGCGCCTATTATAGATGCTTTGAGTAAGAAAAATCTAAATTTGACTTACATACTGAACACCCACCACCATCATGATATCACTAGTGGAAATGCAGAGTTGAAAGAAAGGTACGGGGCAAAGGTAATTGGCTCAGAAATAGACAAGGAAAGAATTCCTGGTATTGATATTTATTTGAGTGATGGAGATAACTGGATGTTTGCAGGTCATGAGGTGCATATATTAGCTACGCCTGGTCACACTGAAGGTCATGTAAGCTTCTACTTTCCGGGATCGGCAGCAATTTTTACTGGAGACACCTTGTTCAGCTTATCATGTGGCGAGCTCTTTGAAGGAACTCCTGAACAGATGTTATCTTCTCTTAAAAGGATCATGTCGTTGCCAGATGAAACAAGTATTTACTGCGGTCATGAATATACATTGAGTAATTCAAAGTTTGCCTTGTCCATAGAACCAGAAAACAAGGAACTTCAATCCTATGCTGCCCATGTAGCTCACATCAGAAATAAGGGCTTGCCCACGATTCCAACTACGCTGAAGATGGAAAAGGCTTGCAATCCATTCCTTCGCACATGGAGCATGGAAATTCGGAAAAAGCTAAATATTGCAGCCACAGCAGATGATGCAGTAGCCCTGGGTGTTATTCGGCAAGCAAAGGATAAATTTTAG 861 0.4123 MRLFSIPLKTLRGASRSLRVDQFCSVVNLSSSLQIELVPCLRDSYAYLLHDVDTGTVGVVDPSEAAPIIDALSKKNLNLTYILNTHHHHDITSGNAELKERYGAKVIGSEIDKERIPGIDIYLSDGDNWMFAGHEVHILATPGHTEGHVSFYFPGSAAIFTGDTLFSLSCGELFEGTPEQMLSSLKRIMSLPDETSIYCGHEYTLSNSKFALSIEPENKELQSYAAHVAHIRNKGLPTIPTTLKMEKACNPFLRTWSMEIRKKLNIAATADDAVALGVIRQAKDKF* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00683 286 PIRSF Glx 28 286 IPR017782 GO:0004416|GO:0019243
Lapu11g00683 286 Pfam Hydroxyacylglutathione hydrolase C-terminus 202 286 IPR032282 -
Lapu11g00683 286 SUPERFAMILY Metallo-hydrolase/oxidoreductase 33 275 IPR036866 -
Lapu11g00683 286 Gene3D - 33 286 IPR036866 -
Lapu11g00683 286 SMART Lactamase_B_5a 43 201 IPR001279 -
Lapu11g00683 286 Hamap Hydroxyacylglutathione hydrolase [gloB]. 33 286 IPR017782 GO:0004416|GO:0019243
Lapu11g00683 286 Pfam Metallo-beta-lactamase superfamily 44 201 IPR001279 -
Lapu11g00683 286 FunFam Hydroxyacylglutathione hydrolase, mitochondrial 33 286 - -
Lapu11g00683 286 NCBIfam hydroxyacylglutathione hydrolase 36 286 IPR017782 GO:0004416|GO:0019243
Lapu11g00683 286 CDD hydroxyacylglutathione_hydrolase_MBL-fold 38 201 IPR035680 -
Lapu11g00683 286 PANTHER BETA LACTAMASE DOMAIN 27 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00683 Lapu-Chr11 9955710 9958914 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00683 K01069 - gmx:100805615 529.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00281 5 2306585 2310739 Lapu11g00683 11 9955710 9958914 PCT