Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00237 ATGACAGACAGGGTGTACCCTTCGGCCAAGCCCGCTGCCGCCGCCGCCGCCAACCCCGCTTTCCCGGCGACGAAGGCCCAACTCTACGGCGCCACCCGTCCCACCTACCGTCCGCAGCCTCACCACCGTCGCCGGAGCAAGCGCCGGTGCTGCTGCACCTTCTGCTTCTGGTTGATCCTCACCGTGCTCGTCCTCCTCCTCCTGATCGGCGTCGCCGGCACCGTGTTCTATCTTCTCTACCGCCCCCACCGCCCGACCTTCACCGTAACGTCCTTGAAGCTTTCGTACCTGAACCTCACCTCCTCCTCCACTTTGAACTCCCGCTTCGACATCACCGTCTCCGCCACCAACCCCAACAAGAAGATCCTCTTCGCCTACGACCCTACCTCCATCTCCATCCTCTCCGGCAACGTCGACGTCGGCGATGGCACCGTCCCTGCCTTCCTGCACGGCAAGAAGAACACCACGCTCATCAAAACTTCCATTGTGAGCACCGGCCACGCGCTCCAGAGCGAGGATGCGTCGCGCTTGAAGTCCAGCATGAAGAGCAAGAACGGGTTACCACTGAAGGTGAATTTGGAAACTAAAGTGAAAGCGAAAATGGGAAAATTGAAAACCCCGAAGGTCGGAATCAGAGTCTCCTGCGACGGAATCAGAGTGAGTCTTCCCTCCGGCAAGAAAGCGGCGACGGCGTCCACTTCGAACGCCAAGTGCAACGTGGATGTTAGGTTCAAGATCTGGAAGTGGACGATTTGA 756 0.5926 MTDRVYPSAKPAAAAAANPAFPATKAQLYGATRPTYRPQPHHRRRSKRRCCCTFCFWLILTVLVLLLLIGVAGTVFYLLYRPHRPTFTVTSLKLSYLNLTSSSTLNSRFDITVSATNPNKKILFAYDPTSISILSGNVDVGDGTVPAFLHGKKNTTLIKTSIVSTGHALQSEDASRLKSSMKSKNGLPLKVNLETKVKAKMGKLKTPKVGIRVSCDGIRVSLPSGKKAATASTSNAKCNVDVRFKIWKWTI* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00237 251 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 12 228 - -
Lapu5g00237 251 Pfam Late embryogenesis abundant protein 112 215 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00237 Lapu-Chr5 1955245 1956512 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00237 25 237 EF-hand Containing Proteins AT5G21130 26.852 1.90e-19 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00237 - - gmx:100819194 394.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00237 5 1955245 1956512 Lapu10g00470 10 7062242 7063334 PCT