Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00470 ATGACTGATAGGGTTCATCCTTCTGCCAAAACAACCGCCAATATCGGCCCCAAGCCAACATTCCCAGCCACAAAATCTCAACTTTCCGGCGCCAACCGCCCCACCTACCGCCCCCAACCTTCCCACCACCGCCGCCGCAGCCGCGGCTGCGCCTCCACCCTCTGCTGCTACCTCCTCCTGATCCTCCTGCTCCTGCTCCTCCTCATCGGCGGCGCCGGAACCGTCCTATACTTCCTCTACCACCCCCAACGCCCCTCATTCTCCGTCAGCTCCCTCAAACTCTCCTACTTCAACCTCACCTCTCCCTCCACCTTCAACGCCAAGTTCGACCTCACTCTCTCAACCACCAACCCCAACGACCAGATCCTCTTCTCCTACGACCCCACCTCTGTCTCCCTTCTTTACAGCGACGCCACGCTCGCCACCGCCACCATCCCCTCCTTCCTCCACCACCAGAGGAACACCACCGTGCTCGAGGCCTACGTCACGAGCACCGAGCAAGCGGTGCAGAGCGATACCGTGATGGAATTGAAGAAGAGCACGAAGGGTAAGAGCGAGGTGGCGCTAAAGGTGAAGTTGGAGACCAAGGTGGAGGCCCAGATGGGTGTGCTCCAAACCCCTCCCGTAGGAATCACCGTATTGTGCGACGGCGTCACCGTGTCTCTTCCCGACGGCGAGAAACCGGCGTCGGCGTCGGTTGAGAATACGGCGTGCGAAGTGGATGTGAGGTTCAAAGTCTGGAAATGGACCGTAGGATGA 759 0.5982 MTDRVHPSAKTTANIGPKPTFPATKSQLSGANRPTYRPQPSHHRRRSRGCASTLCCYLLLILLLLLLLIGGAGTVLYFLYHPQRPSFSVSSLKLSYFNLTSPSTFNAKFDLTLSTTNPNDQILFSYDPTSVSLLYSDATLATATIPSFLHHQRNTTVLEAYVTSTEQAVQSDTVMELKKSTKGKSEVALKVKLETKVEAQMGVLQTPPVGITVLCDGVTVSLPDGEKPASASVENTACEVDVRFKVWKWTVG* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00470 252 SUPERFAMILY LEA14-like 62 200 - -
Lapu10g00470 252 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 11 228 - -
Lapu10g00470 252 MobiDBLite consensus disorder prediction 1 36 - -
Lapu10g00470 252 Pfam Late embryogenesis abundant protein 112 212 IPR004864 -
Lapu10g00470 252 MobiDBLite consensus disorder prediction 1 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00470 Lapu-Chr10 7062242 7063334 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00470 43 239 EF-hand Containing Proteins AT5G21130 26.768 1.86e-16 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00470 - - gmx:102669753 389.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00470 10 7062242 7063334 Lapu10g00470 10 7062242 7063334 ECH
Lapu5g00237 5 1955245 1956512 Lapu10g00470 10 7062242 7063334 PCT