Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00193 ATGGACAAAATCCATTACCACAGGCAGGTAGCTGCTATCAAACACTCCCTCTTTGATCAGGGATATTTGGATGAGCAGTTTATCCAACTGGAAGAATTGCAGGATGATGCTAATCCTAACTTTGTTGAGGAAATTGTCACTCTTTACTACCGTGATTCCTCCAGGCTTATCTCAAACTTGGACCACACACTGGAAAGGAACCCTCTGGATTTCAACAAGCTGGACACAATTATGCACCAGTTTAAAGGAAGCAGCTCAAGCATCGGAGCTAAAAAGGTGAAGGCAGAATGCACTCTGTTTAGGGAATACTGCAGGGCAAGAAATGGAGAAGGATGCAGGAGGAGCTTCCAACAAATGAAGAAAGAATATGCAACACTGAGAAAGAAACTTGAAACATATTTTCAGCTGGCTAGGCAAGCTGGGCCCAAGGAGACAGCATTTCGGCCCAAGTAG 453 0.4437 MDKIHYHRQVAAIKHSLFDQGYLDEQFIQLEELQDDANPNFVEEIVTLYYRDSSRLISNLDHTLERNPLDFNKLDTIMHQFKGSSSSIGAKKVKAECTLFREYCRARNGEGCRRSFQQMKKEYATLRKKLETYFQLARQAGPKETAFRPK* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00193 150 Pfam Hpt domain 44 127 IPR008207 GO:0000160
Lapu5g00193 150 PANTHER PHOSPHORELAY INTERMEDIATE PROTEIN YPD1 7 143 IPR045871 GO:0000160|GO:0009927|GO:0043424
Lapu5g00193 150 FunFam Histidine-containing phosphotransfer protein 4 1 145 - -
Lapu5g00193 150 Gene3D HPT domain 1 146 IPR036641 GO:0000160
Lapu5g00193 150 ProSiteProfiles Histidine-containing phosphotransfer (HPt) domain profile. 38 133 IPR008207 GO:0000160
Lapu5g00193 150 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 5 139 IPR036641 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00193 Lapu-Chr5 1564057 1565210 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00193 K14490 - gmx:100800310 285.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00530 10 7619508 7635540 Lapu5g00193 5 1564057 1565210 ECH
Lapu5g00193 5 1564057 1565210 Lapu5g00193 5 1564057 1565210 ECH
Lapu5g00193 5 1564057 1565210 Lapu10g00530 10 7619508 7635540 PCT