Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00530 ATGGACAGAAACCACTCCCGCAGGCAGCTTGCTGCAATGAAACAGTCCCTCTTTGATCAGGGGTTTCTCGATGAACAGTTTATCCAACTGGAGGAATTGCAGGATGATGCAAATCCCAACTTTGTTGAGGAAATTGTGACTCTTCACTACCGTGATTCATCTCGGCTAATCTCAAGCATAGAGCAGGCTCTCAAAGAGAGAAACCCCCTGGATTTTAACAAACTGGACACTCTTATGCATCAGTTCAAAGGAAGCAGCTCAAGCATAGGAGCCAAAAAGGTGAAAGCAGAGTGCAATCTGTTCAGGGAATATTGCAGGGCAGGAAATGCAGAAGGATGCATGAGGAGCTTCCAACAATTGAAGAAAGAATATGCTGCACTTAGAAAGAAACTTGAAGCTTATTTTCAGTTGGCAAGGCAAGCTGGACCCCAGGAAACAGCATGTCGCTCCAAATAA 456 0.4496 MDRNHSRRQLAAMKQSLFDQGFLDEQFIQLEELQDDANPNFVEEIVTLHYRDSSRLISSIEQALKERNPLDFNKLDTLMHQFKGSSSSIGAKKVKAECNLFREYCRAGNAEGCMRSFQQLKKEYAALRKKLEAYFQLARQAGPQETACRSK* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00530 151 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 7 140 IPR036641 GO:0000160
Lapu10g00530 151 Gene3D HPT domain 2 147 IPR036641 GO:0000160
Lapu10g00530 151 Coils Coil 110 137 - -
Lapu10g00530 151 Pfam Hpt domain 50 128 IPR008207 GO:0000160
Lapu10g00530 151 ProSiteProfiles Histidine-containing phosphotransfer (HPt) domain profile. 38 134 IPR008207 GO:0000160
Lapu10g00530 151 FunFam Histidine-containing phosphotransfer protein 4 1 146 - -
Lapu10g00530 151 PANTHER PHOSPHORELAY INTERMEDIATE PROTEIN YPD1 6 144 IPR045871 GO:0000160|GO:0009927|GO:0043424
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00530 Lapu-Chr10 7619508 7635540 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00530 K14490 - gmx:100526849 295.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00530 10 7619508 7635540 Lapu5g00193 5 1564057 1565210 ECH
Lapu10g00530 10 7619508 7635540 Lapu10g00530 10 7619508 7635540 ECH
Lapu5g00193 5 1564057 1565210 Lapu10g00530 10 7619508 7635540 PCT