Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00134 ATGGCTACGGCGGGTGAAGAAGGGCTTGAGTACGACAGTGATCCCGAAGAGGCCACGAGATCGCTCGCAATGCGGAGAAGGCGCGAGGCGAGTGATGATGAGGAAGGCGACGCCGACGCTGACGCGAGAAACGCCGCCGTCGATCGCCGGATAACCCATTCCGATGACTCCGACGGCGAGGGTGGCGTGGCAGATTATGACGACGAAGAAGAATTGGATGAAGAAGAGGAAGAAGAGGAGGAGGAAGAAGAAGAGGATGAGGGTAGGGTTGGAGAGGAAGGAGGTGTGAATGGTACAGTGGTCAAGGATTCTGATGCTGATGTGAAAGACCCTTTGGAAGAATCAGGAAATGGAGATGATGAAGAGAAGAAGGAGAATGAACCGTTTGCGGTGCCAACTGCCGGAGCATTTTATATGCACGATGATCGCTTCAGGGATAATGCCGGTGCACGCCACAGGCGCATGCGTGGTGGAAGGAGACTCTGGGAGTCCAAGGATGACAGGAAGTGGGGACATGATAAGTTTGAAGAAATTACTCTGCAAGAAAGGCACTACAAGGAGGGAAGGAGGCCTTCTAAGGGTAGTTATCGAGGTCGTGGAGGTAAAACACGAGGTGTTGATCGTAGTGGAGGATATGTTCGAGGTAACAGAAAAGGGTATGATAACAGAGGCAATCAAACTCAGACACCAAAGAGTGTTGTGCGAGGGAGAGGACCCCGTAGGTATGAGCCTGCTAATAAGAGCAATGATTCAGCATCCCAGGTGCAAAATAAACAATATGGGAAGCAGCCAGAGAAAGTTTCTCACGGTGTTTCAGGGAAAACTTTCACTCCTGTTTCTAATTCAGAACCCGATCCTGTACCTTCTAAGAAACAGGTGTTTGCATCCAATTTGAATTATGCATCTCCCCCTTTTTACCCTTCAAGTTCTTCCAATAAAGATACAAGTGTGACAGCTAAAGGGGACGCTCAAACTGCTGCTGCGAGCAGGAACATTCGCCCCGGTGTTGTCGATGATGGTTTTTTGGTTCAACAAAACAATGCACTGCTTCGGGGAAAGAATGTTGTCGATCATGTCAGCATGGAGAAGTTGTATATTGATGGACCTGGCGCTCCATCTGTTGGGAAAGCTTTTAACAATTTGCATATTCCGCCACCTGGATCTTCTGGAGTTAATGCATCTCAGTCTGCTCATCCAAGAGGTACTGGGAGGGGTGGAGCAGTACCGTTGCAAATGAGTTATCAGCCTGCTACTTCTCATAATCAAGCTAGTAAAATTGATCCAACTCAACTCCAGGCTATTCAGAGAACTGCTCCAGGGCGAACTTCACCTTCCGTGCAAGCCCCTGCTCCACAGTTGGGTCATCGACCTGGTAGTGGGTCTCAAGCTTCATCTCCCCCCATCACATCCGCTGCAATTAGTTCATTGGATTCTGGAGAAATTGATGCAGCTTCAGAATCAGGTAAATTGAAGGGTGCATTGGTTGGGAAAGGAAGGGAAGCTTCCCAGGGTAGCGGAAGGGGCTCTTTTGTTTATGGTGGAACTATGGGGACTGCTGGAAATATCAATGGTAATCATGGAGATCAAAACTTCCCAACATTTTTGCCAGTTATGCAATTTGGTGGGCAGCATCCTGGTGGCATAGGAGTTCCTGCTGTTGGCATGGCATTCCCTGGATATGTTGCTCAGCCTCAACTTGGTTTGGGAAACTCTGAAATGACATGGCTACCAGTTTTGACTGGGGCAGCAGGAGCTTTAGGGGCGGCTGGTGCTTTGGGTGCGGCAGGTGCTTTAGGGGCTACATACTGTCCACCCTATCTCACTGTTGATGGTGCTTATCATGCACGACAACCTGGGCAGATATCTGCAACAGCTACTTCAAGCAAGGAAAATAATGTGAATAAAGCTAATAATGAATGGAAGACACCACCAAAGTCTGAGACTGTAAATGAAGAGTTTGGACAGCGGCATAATAAGCCCCGCAGATACTCGGAGATGAACTTTGGGCAATGA 2013 0.4873 MATAGEEGLEYDSDPEEATRSLAMRRRREASDDEEGDADADARNAAVDRRITHSDDSDGEGGVADYDDEEELDEEEEEEEEEEEEDEGRVGEEGGVNGTVVKDSDADVKDPLEESGNGDDEEKKENEPFAVPTAGAFYMHDDRFRDNAGARHRRMRGGRRLWESKDDRKWGHDKFEEITLQERHYKEGRRPSKGSYRGRGGKTRGVDRSGGYVRGNRKGYDNRGNQTQTPKSVVRGRGPRRYEPANKSNDSASQVQNKQYGKQPEKVSHGVSGKTFTPVSNSEPDPVPSKKQVFASNLNYASPPFYPSSSSNKDTSVTAKGDAQTAAASRNIRPGVVDDGFLVQQNNALLRGKNVVDHVSMEKLYIDGPGAPSVGKAFNNLHIPPPGSSGVNASQSAHPRGTGRGGAVPLQMSYQPATSHNQASKIDPTQLQAIQRTAPGRTSPSVQAPAPQLGHRPGSGSQASSPPITSAAISSLDSGEIDAASESGKLKGALVGKGREASQGSGRGSFVYGGTMGTAGNINGNHGDQNFPTFLPVMQFGGQHPGGIGVPAVGMAFPGYVAQPQLGLGNSEMTWLPVLTGAAGALGAAGALGAAGALGATYCPPYLTVDGAYHARQPGQISATATSSKENNVNKANNEWKTPPKSETVNEEFGQRHNKPRRYSEMNFGQ* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00134 670 Coils Coil 63 89 - -
Lapu5g00134 670 MobiDBLite consensus disorder prediction 103 128 - -
Lapu5g00134 670 MobiDBLite consensus disorder prediction 14 33 - -
Lapu5g00134 670 SMART Btz_2 89 200 IPR018545 GO:0003729|GO:0006397|GO:0035145
Lapu5g00134 670 MobiDBLite consensus disorder prediction 40 60 - -
Lapu5g00134 670 MobiDBLite consensus disorder prediction 377 480 - -
Lapu5g00134 670 MobiDBLite consensus disorder prediction 246 263 - -
Lapu5g00134 670 MobiDBLite consensus disorder prediction 625 670 - -
Lapu5g00134 670 MobiDBLite consensus disorder prediction 385 399 - -
Lapu5g00134 670 MobiDBLite consensus disorder prediction 159 204 - -
Lapu5g00134 670 MobiDBLite consensus disorder prediction 1 331 - -
Lapu5g00134 670 MobiDBLite consensus disorder prediction 457 476 - -
Lapu5g00134 670 PANTHER PROTEIN MLN51 HOMOLOG 1 670 IPR044796 GO:0003729|GO:0006397|GO:0035145
Lapu5g00134 670 MobiDBLite consensus disorder prediction 412 449 - -
Lapu5g00134 670 MobiDBLite consensus disorder prediction 61 90 - -
Lapu5g00134 670 MobiDBLite consensus disorder prediction 273 325 - -
Lapu5g00134 670 Pfam CASC3/Barentsz eIF4AIII binding 111 201 IPR018545 GO:0003729|GO:0006397|GO:0035145
Lapu5g00134 670 MobiDBLite consensus disorder prediction 625 644 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00134 Lapu-Chr5 1122165 1127032 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00134 - - gmx:100816837 1046.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00134 5 1122165 1127032 Lapu5g00134 5 1122165 1127032 ECH
Lapu5g00134 5 1122165 1127032 Lapu10g00583 10 8048340 8053728 PCT