Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00583 ATGGCTACCTTGGTTGAAGAAAACAACATTGAGTATGATAGTGATCCCGAAGAGGCAACGGGACCGTTAGCAATGCGGAGGCGCGAAGCAAGCGATGACGAAGAAGCCGAAGGGGAAGAAGTCACTGATAAGAGGGAAGGTCGTAGAGTAGAGGTTCGTTCTGATGACTTAGATGATGAAGGAGGTGTTGAAGATTATGCTGATGATGGTGATGATGTCGAAGAAGGAGAAGAAGAATTGCAAGAAGAAGAGGAGGAAGTTGAAAAGGTGTACGAGGGGAAGGATGCTAGTGGTGGGGTTGAGGTTGAGGGTTCAGTGGTTGTGGCTAAGGAATCTGATGATGATGTCAGACCCCCTTTGGAAGATTCTGTTGAGGACCATTCTGAGGAGAAAAAGGAGTCTGATCCATTTGCGGTGCCCACAGCCGGAGCTTTTTACATGCACGATGACCGATTTAGGGACAATGCTGGTACCCGCAACAGATGGATACACGGTGGTGGAAGGAGACTGTGGGAGTCCAAAGATGACAAGAAATGGGGACATGATAAATTTGAGCAAATTTTGCACGAAAGGCATTATGAGGAGAGGAGACCTTCGAAGGGTAATTATCGTGGCCGGGGTAATGGTCGAGGCACTGATAGTGGAGGGTATGTCCGAGGAAGTAGGAAAGGATATAATAATAACAGTAGCAATCAAAACCAGATGCCTAGGAGTGTTGTGAGAGGAAGAGGCCCCCAAAAGTATGAACGTACCAAGAAAAACAATGGTCCATCTCCCCAAGGGCAAAATAAACTATCTGGGAAATCTCGTGAGAAAAATTCAAATGTTGGTTTGGGGAGGACTTCCACACCTTCCCATGCAGAATCTGACCCTGTGCCAGCTAAAAATCAAGTGCTTGCTTCAAATTTGAATTCAGCATCCCCGCCATATTACCCATCAGGTTCTTCCAGCAATGATATTAATTTGGCACCAAAAAAGGAGGTACAGACAGGTGGCAGTGGCAGGAACATTGGTCCTGTTGTTATGGATGAGGATTTTCCAGTTCAACAAAACAATGCTTTGATTCAGGGAAAGAATGTTATTGATTCCATCAGCATGGCAAAGCTGTCTATTGATGATTCCATCCCTCCATCTGTTGGAAAGCCTTTAAACAATGTGCATATGGCACAACCTGGATCTTCTGGAGCCAATGCTTCTCAATCTCCTCACCTAAGGGCTTCTGGGACTGGGAGGGGTGTATCAATCCCAGTACAGACAAATTTTCAGCGTGCTCCCTCACATAATAAAGTTTCATCATCACAATTCCAGGCTATTCAGACAAGTTCTGTTCCAGGGAGGAATTCAACTTCTGTGCAAGCTACTGCCCCACCGCTGGGCCATAGACCTGGCAGTGGATCTCCATTGTCACCCCCCTCTAAAACGTCCAAGACAATTGATTTACGTGATTCTGGAGAAATGGATTCAGCGCCAGAATCAGGTAAAGGCAAAGGTGCTTTGGTTGGGAAGGGGAGGGGAGGTAACCATGGCGCAGGACAGGGAACTTTTGTTTATGGTGGGGCACAAGTAATAGGAACCGCTGGAAATGTAGGTGTTAGCCATGGAGATCCAAACTTCCCTGCCTTCTTGCCAGTCATGCAATTTGGGGGCCAGCATCCTGGTGGTATTGGAGTTCCTGCTGTTGGCATGGCATTCCCTGGATACGTAGCCCAGCCTCAACTGGGAAAGTCAGAGATGACATGGCTACCAGTCTTGGCTGGTACTGCAGGAGCTTTAGGGGCTACATACCCATACCTTGCTGTTGATGGTGCAAGCAGTCACCAATCTGGACAGGCCTCTGCAATGGGTACTTCAAGCAAGGAACATGGTGTTAACAAAGCTAATAATGAATTGAAACCACCTCAGAGATCTGAGCTTGCAAATGAAGAGTTTGGACAAAGGCAGAATAAACCCCGAAGATACTCAGAGATGAATTTTGGTCAGTGA 1983 0.469 MATLVEENNIEYDSDPEEATGPLAMRRREASDDEEAEGEEVTDKREGRRVEVRSDDLDDEGGVEDYADDGDDVEEGEEELQEEEEEVEKVYEGKDASGGVEVEGSVVVAKESDDDVRPPLEDSVEDHSEEKKESDPFAVPTAGAFYMHDDRFRDNAGTRNRWIHGGGRRLWESKDDKKWGHDKFEQILHERHYEERRPSKGNYRGRGNGRGTDSGGYVRGSRKGYNNNSSNQNQMPRSVVRGRGPQKYERTKKNNGPSPQGQNKLSGKSREKNSNVGLGRTSTPSHAESDPVPAKNQVLASNLNSASPPYYPSGSSSNDINLAPKKEVQTGGSGRNIGPVVMDEDFPVQQNNALIQGKNVIDSISMAKLSIDDSIPPSVGKPLNNVHMAQPGSSGANASQSPHLRASGTGRGVSIPVQTNFQRAPSHNKVSSSQFQAIQTSSVPGRNSTSVQATAPPLGHRPGSGSPLSPPSKTSKTIDLRDSGEMDSAPESGKGKGALVGKGRGGNHGAGQGTFVYGGAQVIGTAGNVGVSHGDPNFPAFLPVMQFGGQHPGGIGVPAVGMAFPGYVAQPQLGKSEMTWLPVLAGTAGALGATYPYLAVDGASSHQSGQASAMGTSSKEHGVNKANNELKPPQRSELANEEFGQRQNKPRRYSEMNFGQ* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00583 660 MobiDBLite consensus disorder prediction 387 455 - -
Lapu10g00583 660 MobiDBLite consensus disorder prediction 221 239 - -
Lapu10g00583 660 Pfam CASC3/Barentsz eIF4AIII binding 125 207 IPR018545 GO:0003729|GO:0006397|GO:0035145
Lapu10g00583 660 MobiDBLite consensus disorder prediction 107 136 - -
Lapu10g00583 660 MobiDBLite consensus disorder prediction 1 140 - -
Lapu10g00583 660 MobiDBLite consensus disorder prediction 606 634 - -
Lapu10g00583 660 MobiDBLite consensus disorder prediction 41 56 - -
Lapu10g00583 660 MobiDBLite consensus disorder prediction 57 89 - -
Lapu10g00583 660 Coils Coil 66 93 - -
Lapu10g00583 660 PANTHER PROTEIN MLN51 HOMOLOG 1 660 IPR044796 GO:0003729|GO:0006397|GO:0035145
Lapu10g00583 660 MobiDBLite consensus disorder prediction 380 506 - -
Lapu10g00583 660 SMART Btz_2 109 209 IPR018545 GO:0003729|GO:0006397|GO:0035145
Lapu10g00583 660 MobiDBLite consensus disorder prediction 165 202 - -
Lapu10g00583 660 MobiDBLite consensus disorder prediction 251 324 - -
Lapu10g00583 660 MobiDBLite consensus disorder prediction 606 660 - -
Lapu10g00583 660 MobiDBLite consensus disorder prediction 152 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00583 Lapu-Chr10 8048340 8053728 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00583 - - gmx:100792594 823.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00583 10 8048340 8053728 Lapu10g00583 10 8048340 8053728 ECH
Lapu5g00134 5 1122165 1127032 Lapu10g00583 10 8048340 8053728 PCT