Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00133 ATGGAGGAAAGCATCAATAGAGGGGAATTTCAGCCTAATTTGGCTAAACAGACTTCATTGAGGTTAGGTGGCAGTTTTAAATCAACGTTATCTGGAAGATCAACTCCGCGAAATTCGCCTTCATTTCGGCGACTGAATTCTGGCCGTACACCGAGAAAAGAAGGAAGGAGCAGTGTAGGCGGGGCACTGTGGTTTCGGAGCAATCGTTTAGTTTTCTGGTTGCTTCTAATTACCCTCTGGGCTTATCTTGGATTTTTTGTTCAGTCCAGGTGGGCTCATAGTGAAAAGAAGGAGGAATTTTCTGGCTTTGGAACTGGCCCCCGAAATACTGGCTCAGAAGCTGAACAGGTTCAGCGCCGTGATTTGCTTGCTAGTGATAATTCATTGTCTGCTTATAATGAGACTGATGCAAATATAGCAGGTACTAGTAAAACTATAAATGTAGCTTTGGCCAAGAAAGGCAGTGATGTTCCATCTCCTCGTAAAACGAGCTCAAAGAAGAGGAGCAGGAGAAGACGTGCTTTGAAAGGTAAATCAAGTGGTAAGCTGAAACCGACTACGGAAGTTAAGAACACTGATATAGAGGAGCTGGAGCCAGAAATTCCTACTGCCAATAGTACGTATGGATTGCTTGTTGGTCCGTTTGGCCCAGTGGAGGATAGGATTCTGGAATGGACTCCAGAGAAACGTTCTGGGACATGTAACAGGAAGGGGGACTTTGCACGTCTGGTTTGGTCCAGAAGATTTATCTTGATATTCCATGAGCTTTCCATGACTGGCGCTCCACTTTCAATGATGGAGTTGGCAACAGAACTTTTGAGCTGTGGGGCTACGGTTTCAGCTGTTGTGCTTAGCAAGAAAGGTGGTTTGATGTCAGAGCTCTCTAGGAGACGGATCAAGGTGCTTGAGGACAAAGCTGATCTCAGCTTCAAAACTGCAATGAAGGCTGATCTTGTCATTGCTGGTTCAGCTGTCTGTGCTTCATGGATTGAACAATATATCGAACATTTTCCTGCTGGTGCTAGCCAAGTTGCCTGGTGGATTATGGAAAATCGGCGAGAGTACTTTGATCGTTCAAAAGATGTATTGGACAGAGTAAAGATGTTGGTTTTTCTTTCTGAATCACAATCTAAACAGTGGCAAAAATGGTGTGAAGAGGAAAGCATGAAACTGAGATCCCACCCTGAAATTGTTCCATTGTCTGTTAATGATGAACTGGCATTTGTAGCTGGTATTCCTTCAACACTTAACACTCCAACCTTTAGTACTGAGAAAATGGCTGAGAAAAGGCAGTTATTGCGAGAATCAATCCGAAAAGAAATCGGCCTAACTGATAATGACATGCTTGTGATGTCTCTTAGTAGCATCAATCCTGGGAAGGGCCAGCTATTACTTCTTGAATCAGTAAGCTCAGTACTTGAACAAGGATGGTTGCAAGATGATAAGAAGGTGAAAAAGGTATCGAATGTAAAGGAAGGCATATCTACCCTGGCTAGAAAGCATCGTATTAGAAAATTGTTGCCGGTGTTGAAGAATGGCAAAGTAGTTTCAAATGATATCTCAGGCCATTCTTTAAGCAGGAGGAAACAAGTTTTGCCTAATGACAAAGGAACAATTCAACAATCTCTCAAACTTCTGATTGGTTCTGTTAGATCAAAGAGTAACAAGGCGGATTATGTTAAAAGCCTTCTAAATTTCTTGGAACAACATCCAAACACCTCAAAATCAATCTTTTGGACTCCAGCCACAACTCGGGTTGCCTCACTTTACTCTGCTGCTGATGTTTATGTTATAAACTCTCAGGGGCTGGGAGAAACATTTGGACGTGTGACTATTGAAGCGATGGCGTTTGGTCTTCCGGTTCTTGGAACGGAAGCTGGGGGAACACAGGAGATTGTTGAGCACAATGTTACAGGTCTTCTTCATCCTGTTGGACATCCCGGGAATGTTGTTCTCGCACAGAATCTCCGGTTTTTACTTAAAAACCAGTTGGCAAGGAAGCAAATGGGGGTGGAAGGAAGAAAGAAGGTGCAGCGGATGTATCTGAAGCAACACATGTATAAGAAATTTGTAGAGGTCATTGTTAGGTGCATGAGAAGCAAATAA 2106 0.4316 MEESINRGEFQPNLAKQTSLRLGGSFKSTLSGRSTPRNSPSFRRLNSGRTPRKEGRSSVGGALWFRSNRLVFWLLLITLWAYLGFFVQSRWAHSEKKEEFSGFGTGPRNTGSEAEQVQRRDLLASDNSLSAYNETDANIAGTSKTINVALAKKGSDVPSPRKTSSKKRSRRRRALKGKSSGKLKPTTEVKNTDIEELEPEIPTANSTYGLLVGPFGPVEDRILEWTPEKRSGTCNRKGDFARLVWSRRFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKKGGLMSELSRRRIKVLEDKADLSFKTAMKADLVIAGSAVCASWIEQYIEHFPAGASQVAWWIMENRREYFDRSKDVLDRVKMLVFLSESQSKQWQKWCEEESMKLRSHPEIVPLSVNDELAFVAGIPSTLNTPTFSTEKMAEKRQLLRESIRKEIGLTDNDMLVMSLSSINPGKGQLLLLESVSSVLEQGWLQDDKKVKKVSNVKEGISTLARKHRIRKLLPVLKNGKVVSNDISGHSLSRRKQVLPNDKGTIQQSLKLLIGSVRSKSNKADYVKSLLNFLEQHPNTSKSIFWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGLPVLGTEAGGTQEIVEHNVTGLLHPVGHPGNVVLAQNLRFLLKNQLARKQMGVEGRKKVQRMYLKQHMYKKFVEVIVRCMRSK* 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00133 701 MobiDBLite consensus disorder prediction 24 58 - -
Lapu5g00133 701 Pfam Glycosyl transferases group 1 561 675 IPR001296 GO:0016757
Lapu5g00133 701 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 256 694 - -
Lapu5g00133 701 PANTHER BNAA05G14870D PROTEIN 1 701 - -
Lapu5g00133 701 MobiDBLite consensus disorder prediction 24 46 - -
Lapu5g00133 701 MobiDBLite consensus disorder prediction 164 179 - -
Lapu5g00133 701 CDD GT4_PimA-like 250 694 - -
Lapu5g00133 701 MobiDBLite consensus disorder prediction 150 188 - -
Lapu5g00133 701 Gene3D Glycogen Phosphorylase B; 421 681 - -
Lapu5g00133 701 Pfam Glycosyl-transferase family 4 245 414 IPR041693 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00133 Lapu-Chr5 1117134 1121450 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00133 24 699 Glycosyltransferase AT3G15940 61.752 0.0 828
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00133 - - gmx:100793827 1225.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00133 5 1117134 1121450 Lapu5g00133 5 1117134 1121450 ECH
Lapu5g00133 5 1117134 1121450 Lapu10g00584 10 8055143 8058893 PCT