Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00584 ATGGAGGATTGCAACAACAAAGGAGAAGTTCATGCAAATTTTACAAAGCAGAAGAACTCTTCAGCAAGATCAGGTATCAGTTTGAAATCTACGTTATCTGGAAGGTCAAGTCCACAAAATTCTTCTTCATTTCAGCAACCACGTTCTACCTTAACACCAAGAAGAGAAAGCAAGGGTGTTGCACAGTGCTACGGGAGCAACCGGTTACTGTTGTGGCTGCTTCTGATAACCCTTTGGGCTTATCTTGGATTTTGTGTTCAGTCTAGGTGGGCACATGATGATAAAGAGGAGGAATTTTCAGGCTTTAAAAGCAGGCCAAGTGATACAACAAACTTGTATGTTGAACAGAATCAGCATCATGTTTTGATTGCCAAAAACATTTCCCTATCTGTTAACATTGAAAAAGTTGGAAACAAAACACTGGATGTGGTTTTGGCCAAGAAAGAATACGGTGTTCTATCTCAAGTTAAAGCTAGCTCAAGGAAAAGAAGAAAGCGACCAATGCATGTTTTGAGAGGTAAGAGAAGGCGAAAACATACACTTGAGGCCAGTGGTTTAGACGAGCTGGAGCCAGAGATTCCCCCAAGGAATTCTACCTATGGGTTCCTTGTTGGTCCATTTGGTTCATTAGAGGATAGAATTCTGCAATGGAGTCCTCGGAGGCGTTATGGAACCTGTGACACGAAAGGGGACTTTGCACGTCTTGTTTGGTCAAGAAGGTTTGTTTTGATATTTCATGAGCTTTCCATGACTGGAGCTCCACTTTCAATGATGGAGTTGGCAACTGAACTCTTGAGTTGTGAGGCTTCTGTTTATGCTGTGGTGCTTAGCAGGAAGGGTGGTTTGATGCAAGAGCTTGCTAAGAGACAAATCAAAGTGCTTGATGACAAAGCATATCTCAGCTTCAAAACTGCAACCAAGGCAGATCTTGTCATTGCTGGATCAGCCGTCTGTGCATCATGGATTGAACAATACATTGAACATTTTCCCGCTGGAGCAAGTAAAGTTGCTTGGTGGATTATGGAAAACAGACGAGAGTACTTTGATCGTGCAAAGGATGTATTGCACAGAGTGAAAATATTGGTTTTTCTCTCTGAAGCACAATCTAAGCAATGGCAAAAATGGTGTGAAGAAGAGAGCGTAAAATTGGGACTACAGCCAGCACTTGTTCCATTGTCTGTCAATGATGAACTAGCTTTTGTAGCAGGCATTCCCTCTACACTTAATGATCCATCCTTCAGTGCTACAAAAATGGATCAGAGGAGGAAGTTGTTGAGAGATTCAATTCGAAGAGAAATGGGGTTGAGTGATAATGATATGCTTGTTATGACTCTGAGTAGCATCAACCGTGGGAAGGGTCAGCTATTTCTTCTTGAATCAGCAAGATCTATTGTAGAAGATAAACCATTGCACCATGATAATAAGAAAATGCCAGTGTCATCACATGATCTATCTACCTTGGCTACAAGACATCATATTAGAAAATTGTTCGAGGATAGTGGTTTTTATGTTCACAGCAAGGAAGTGTTCTCCCACAACAATGGAACAACGGCACAATCTCTCAAAATTCTCATTGGTTCTGTGGGATCTAAGAGCAACAAAGTGGATTACGTTAAAGGTCTTCTAAGATTTTTATCACAGCATTCAAACTTGTCAAAGTCAGTTTTGTGGACCTCAGCCACTACACGTGTGGCCTCACTTTACTCTGCTGCAGATGTTTATGTCACAAACTCTCAGGGATTGGGAGAAACATTTGGACGGGTGACTATAGAAGCAATGGCATTTGGTCTTCCGGTGCTTGGAACAGATGCAGGAGGAACGCAAGAAATTGTTGAACATAATGTGACAGGTCTGCTTCATCCTATTGGACGCACAGGGAATCATGTCCTTGCACAGCATCTCCGGTTTTTACTTGAAAACCGGTTTGCAAGAGAGAAAATGGGGATAGAAGGAAGAAAAAAGGTGCAGAGGATGTTCTTGAAGCAGAACATGTATGAGAAATTTGTAGATGTTCTTGTCATGTGCATGAGAACCAAATAA 2040 0.4167 MEDCNNKGEVHANFTKQKNSSARSGISLKSTLSGRSSPQNSSSFQQPRSTLTPRRESKGVAQCYGSNRLLLWLLLITLWAYLGFCVQSRWAHDDKEEEFSGFKSRPSDTTNLYVEQNQHHVLIAKNISLSVNIEKVGNKTLDVVLAKKEYGVLSQVKASSRKRRKRPMHVLRGKRRRKHTLEASGLDELEPEIPPRNSTYGFLVGPFGSLEDRILQWSPRRRYGTCDTKGDFARLVWSRRFVLIFHELSMTGAPLSMMELATELLSCEASVYAVVLSRKGGLMQELAKRQIKVLDDKAYLSFKTATKADLVIAGSAVCASWIEQYIEHFPAGASKVAWWIMENRREYFDRAKDVLHRVKILVFLSEAQSKQWQKWCEEESVKLGLQPALVPLSVNDELAFVAGIPSTLNDPSFSATKMDQRRKLLRDSIRREMGLSDNDMLVMTLSSINRGKGQLFLLESARSIVEDKPLHHDNKKMPVSSHDLSTLATRHHIRKLFEDSGFYVHSKEVFSHNNGTTAQSLKILIGSVGSKSNKVDYVKGLLRFLSQHSNLSKSVLWTSATTRVASLYSAADVYVTNSQGLGETFGRVTIEAMAFGLPVLGTDAGGTQEIVEHNVTGLLHPIGRTGNHVLAQHLRFLLENRFAREKMGIEGRKKVQRMFLKQNMYEKFVDVLVMCMRTK* 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00584 679 PANTHER BNAA05G14870D PROTEIN 1 679 - -
Lapu10g00584 679 CDD GT4_PimA-like 240 672 - -
Lapu10g00584 679 Gene3D Glycogen Phosphorylase B; 413 659 - -
Lapu10g00584 679 Pfam Glycosyl-transferase family 4 237 406 IPR041693 -
Lapu10g00584 679 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 251 671 - -
Lapu10g00584 679 MobiDBLite consensus disorder prediction 10 56 - -
Lapu10g00584 679 MobiDBLite consensus disorder prediction 1 57 - -
Lapu10g00584 679 Pfam Glycosyl transferases group 1 542 653 IPR001296 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00584 Lapu-Chr10 8055143 8058893 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00584 27 677 Glycosyltransferase AT1G52420 58.894 0.0 741
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00584 - - gmx:100796443 1083.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00584 10 8055143 8058893 Lapu10g00584 10 8055143 8058893 ECH
Lapu5g00133 5 1117134 1121450 Lapu10g00584 10 8055143 8058893 PCT