Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g01017 ATGGAGGTACATTCTCCAGTTATAGCCAAGAAGCTGTGGAATGTGTTGAGGATCACCTTCTTCATGATCAGGAAGGGTTTGGTGTCAAAGAGGAAGCTGATTATGGACATGAATTTGATGATGAAAAAGGGAAAACTGCTCAGAAAATCTATGAGCAATTTCATGTCATCTCATCATAATCATCATCATCACTCGAAGAGTTTGGTACGTGGCTATGGCATACAGGAATATGAATTCTCTTGCAGCAACAGTCCAAATCCTGTTTTTTTCCATGTGCCAAAGAGGAAGCACCATTTCAACTTCCCTTGCATCAACACCCCAGAGGTTGTTGAAGAACCTAGGCCTGTGGTTTTGGTGCCTATGACACCTGAATACACTTTCAACCTTAGGTTTGATGCATCTGATTATGCTCCTGGAGAGAGGAAGAGCCCCCTCCTCTCACCCTTCTCTGTGAGGATATCCAACTACTCATCTGAGGATGAGAATGAAGAGGGTGGAAATCAAGTCGATGATCAGGCTGAGGATTTCATCAGAAGGTTCTATGAACAGCTAAGAATGCAAAGCCGCATGCAGTTGCTTCAGTATCAAGAGATGTGA 597 0.4338 MEVHSPVIAKKLWNVLRITFFMIRKGLVSKRKLIMDMNLMMKKGKLLRKSMSNFMSSHHNHHHHSKSLVRGYGIQEYEFSCSNSPNPVFFHVPKRKHHFNFPCINTPEVVEEPRPVVLVPMTPEYTFNLRFDASDYAPGERKSPLLSPFSVRISNYSSEDENEEGGNQVDDQAEDFIRRFYEQLRMQSRMQLLQYQEM* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g01017 198 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 5 196 - -
Lapu4g01017 198 Pfam Cotton fibre expressed protein 167 198 IPR008480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g01017 Lapu-Chr4 26094661 26095875 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g01017 - - pvu:PHAVU_004G067900g 339.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g00478 1 15889041 15889376 Lapu4g01017 4 26094661 26095875 PCT