Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00478 GTGCCAAAGCGCAAGCACCATTTCAACTTTCCCTGCATCCATGCCCCTGAAGTTCTCGATGATGATCACCGTTTTTCATTCGAAGTTGGAGGTGATGAGCATAAGGATGTGGTTACCGTGCCCAAAACACCAGAATGTATGTACAACATTTTTGTCCCTGGAGACAGAAAGAGCCCTCTTCTCTCACCTTTTTCTGTGAGGGTGTCCAATTATTCTGCATTGGATGAAATTGAAGAAATTGGAAGTGATCGTGTTGATGATCAAGCTGAGGATTTTATCAGACGGTTCTATGAACAGCTTAGGATGCAAAGCCCCGTGCAGTTCCTAGGTTACTGA 336 0.4464 VPKRKHHFNFPCIHAPEVLDDDHRFSFEVGGDEHKDVVTVPKTPECMYNIFVPGDRKSPLLSPFSVRVSNYSALDEIEEIGSDRVDDQAEDFIRRFYEQLRMQSPVQFLGY* 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00478 111 Pfam Cotton fibre expressed protein 83 104 IPR008480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00478 Lapu-Chr1 15889041 15889376 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00478 - - gmx:100790324 169.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g00478 1 15889041 15889376 Lapu1g00478 1 15889041 15889376 ECH
Lapu1g00478 1 15889041 15889376 Lapu4g01017 4 26094661 26095875 PCT