Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00257 ATGATCACCTTACTAGACTTCTACCATGTCATGACTGCAATGGTGCCACTCTATGTGGCTATGATACTAGCCTATGGCTCAGTTAAGTGGTGGAAGATTTTCTCCCCTGACCAATGTTCTGGCATCAACCGTTTTGTGGCACTCTTTGCTGTGCCTCTTCTTTCCTTCCACTTCATAGCATCCAACAACCCTTACAAGATGAACCTTAGGTTCCTAGCTGCTGACACTCTTCAGAAGATCATAATACTAGTCCTTCTTGCGGTCTGGAGCAACTTCACCAAAAGGGGTTGCTTGGAGTGGACCATAACCTTGTTCTCCCTCTCCACCCTCCCAAACACTTTGGTCATGGGCATCCCTTTGCTCAAAGGGATGTATGGTGAGTTCTCAGGGAGTCTAATGGTGCAAATTGTGGTTCTTCAGTGCATCATTTGGTACACCTTGATGCTATTCATGTTTGAGTTCAGGGGTGCCAGATTGCTAATCTCTGAGCAGTTCCCTGACACTGCTGGCTCCATTGTCTCCATCCATGTGGACTCTGATGTCATGTCATTGGATGGAAGGCAACCACTTGAGACTGAAGCCGAGATCAAAGAAGATGGGAAACTACATGTCACTGTGAGGAAATCCAATGCCTCAAGATCAGACATCTTCTCTAGAAGGTCTCAGGGTCTTTCTTCCACCACTCCACGCCCTTCTAACCTCACAAATGCGGAGATATACTCTTTGCAGTCTTCTAGGAACCCAACACCAAGAGGGTCTAGCTTCAACCATACTGACTTCTACTCAATGATGGCTGCTGGTGGCAGAAACTCCAACTTTGGAGCCTCTGATGTTTACGGACTTTCAGCTTCAAGAGGGCCAACTCCAAGGCCTTCCAACTATGATGAAGATGGTGGGAAGCCAAAGTTTCATTACCATGCTGGTGGAACTGGACACTACCCTGCCCCAAACCCTGGCATGTTCTCTCCCTCTAATGGGTCCAAAAGTGTTGCTGCTACTAATGCTAATGCTAATGCTAATGCTAATGCCAAGAAGCCCAATGGGCAGGCTCAGCTGAAGCCTGAGGACGGGAATAGGGACCTTCATATGTTTGTTTGGAGTTCAAGCGCTTCACCAGTTTCGGATGTGTTTGGTGGCCACGAGTATGGCGGTCATGATCAGAAAGAAGTCAAATTGACTGTTTCTCCAGGAAAAGTGGAGAATCATAGAGACACTCAGGAGGACTACCTAGAGAAAGATGAGTTCAGCTTTGGGAATAGAGGAATGGACAGGGAGATGAATCAGCATGAGGGTGAGAAAGTTGGGGATGGGAAGCCAAAAACCATGCCTCCAGCAAGTGTGATGACAAGACTTATATTGATTATGGTGTGGAGAAAACTCATCAGAAACCCCAACACCTACTCCAGTTTAATTGGCCTCACCTGGTCTCTTGTTTCGTTCAGGTGGAATGTTGAGATGCCTGCCATAATAGCAAAGTCTATCTCCATATTGTCAGATGCAGGGCTTGGCATGGCCATGTTCAGTCTTGGTCTCTTCATGGCTTTGCAACCGAGGATCATAGCATGTGGAAATTCCATAGCAGCTTTTGCCATGGCTGTGAGATTCCTTACAGGTCCAGCTGTCATGGCAGCTGCTTCCATTGCTGTTGGACTCAAAGGTGTTCTCCTACACGTTGCCATTGTTCAGGCAGCTCTTCCCCAAGGAATTGTCCCATTTGTCTTTGCTAAGGAATATAATGTACATCCTGATATTCTCAGCACAGCTGTTATTTTTGGGATGTTGATTGCGTTGCCCATAACTCTAGTGTTCTACATTTTGATGGGGTTGTAA 1830 0.4661 MITLLDFYHVMTAMVPLYVAMILAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFHFIASNNPYKMNLRFLAADTLQKIIILVLLAVWSNFTKRGCLEWTITLFSLSTLPNTLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEFRGARLLISEQFPDTAGSIVSIHVDSDVMSLDGRQPLETEAEIKEDGKLHVTVRKSNASRSDIFSRRSQGLSSTTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHTDFYSMMAAGGRNSNFGASDVYGLSASRGPTPRPSNYDEDGGKPKFHYHAGGTGHYPAPNPGMFSPSNGSKSVAATNANANANANAKKPNGQAQLKPEDGNRDLHMFVWSSSASPVSDVFGGHEYGGHDQKEVKLTVSPGKVENHRDTQEDYLEKDEFSFGNRGMDREMNQHEGEKVGDGKPKTMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLTWSLVSFRWNVEMPAIIAKSISILSDAGLGMAMFSLGLFMALQPRIIACGNSIAAFAMAVRFLTGPAVMAAASIAVGLKGVLLHVAIVQAALPQGIVPFVFAKEYNVHPDILSTAVIFGMLIALPITLVFYILMGL* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00257 609 NCBIfam auxin efflux carrier 1 609 IPR014024 -
Lapu4g00257 609 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 608 - -
Lapu4g00257 609 Pfam Membrane transport protein 9 604 IPR004776 GO:0016020|GO:0055085
Lapu4g00257 609 MobiDBLite consensus disorder prediction 213 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00257 Lapu-Chr4 2580792 2585525 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00257 1 600 Organic Solute Cotransporters AT1G73590 74.209 0.0 875
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00257 K13947 - gmx:100499637 1165.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03954 3 62969187 62973179 Lapu4g00257 4 2580792 2585525 PCT