Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00188 ATGCCATGTTCCAAAGAAGAAGCTCTTGTCAGACTCTTCTACAATGCCTCTAGCTCCTTCCACCTTCTCTTCCTCCTCCTCTTCTCCTCTTCCCTTTTGCTTATCAAGTTCTTAAACTTCATTGCCAGCTTCACCATCTTCCAAAGAGATCACCACTATGAATATGTGTCTTCTGAGTATGATGAAGAAGAAGAAGAAGAAATTCAAGAAAGATACTCTTATGTGCATGATTCTAGTGAGTCAGATCACCTAGTAGCTGACATCATTGGTGGTGGAGAAACCCTTTTGTTTGTGCACAACAACCATTCTCTGAGGACTTATTCTTCTTCTGATGAATTCATAAGCCCCCGGGATAGCCTTATTGAAGAAGAGTCAGAAGAAAACTATTCAACAGAAACCTTGTCTTTTCACAAGTCACCTTTGGTCTCAGAAAATGAAGAAGAGGCAGAAGAATTTCCAACTGAAGATGCTGATTCTGTTCCGACTTCTGTCCCAGATGAAAGCAGGCCCACATCCCCCATCACACTGAACCTCTACAAAAGTGACTCACCAGACAATGACAAAAACTATGACGCTGATTCTATTTTCTGTGCAGAAGATCGTGTTGAAAATAAGAAGGTGCAAGAGGCAAGCCTCACACGAGATGAGAGATTCTTGGTGTATGCTCCTACCCAATTGGAGGCCAAGAAACTCATTGTTGAGGAAAAGGATGAGGAAGAAATATATGGTGACTCATGCACTGTTGGATCAACTTCTAAGAGTTCCTCTGAGTGGAGGAGCTCTATTAACTGCAGAGATTCTGGAACTGATGACCCTTTTTCTTCCTCATCAAGAAGAAGTTGCCCCAAGTGGGAATCCTACACAGTTTTCCAAAAATATGATGAAGAAATGTCATTCCAAGATAGAATTAGTGCACAGAAACTTCAAGAAATTGAATCTTTAAGGTCTATCAAGGTATCTCCGAGGTCAATTTCAGAGCGCATTGTGTTCAAGTTTTCAAGTATGAATAAAAAACCAGGTGATACACGTCACAACCCATATCATGAAATTGAGTCTGCATATGTTGCCCAAATTTGCTCAACATGGGAAGCTCTTAATTGGAACTACAAGAATTTTCAATCCAAACGAGCTTCACGAGGCCATGATGCTGATGTGGGTTGTCCAGCCACCATTGCACAGAGATTACAACAATTTCAAGTGTTGTTGCAGAGATACGTAGAAAACGAGCCTTATGAGCATGGTAGAAGACCAGAGATCTATGCTAGAGTGAGACATTTGGCTCCAAAATTGCTACTAGTTCCAGAATATCGAGAATCAGAAGATGATCAGAGGGACGAAAATGGTTTTCAGTCCAAAATATCACCAGCTTCATTTCTTATGATAATGGAAGATGGCATCAGAACGTTCATGAGTTTTCTGAAGGCTGATAAAGAGAAACCATGTCAGATATTTGCAGCTTACTTTAGGAGAAACCGAAGAGCCTTGGTTGATCCAACACTTCTACGCCTCATCAAGAAAGTTAATCAAAAGAAGAAGATGAAAGTGAAGGACCTTCGACGTTCAAACAGATGCTTGAGGAAGAGAAAGTTAAAGGGAGAAGAAGAGATGGAGATTTTGATGGCACTCATAGACCTGAAAGTGGTGTCAAGGGTTTTGAGAATGAGTGAGTTAAGTGAGGAACAGTTGCATTGGTGTGAAGAGAAGATGAGCAAAGTGAGAGTGGTGGAGGGAAAACTACAAAGAGATTCCACTCCACTTTTTTTCCCTGCACATTGA 1776 0.4105 MPCSKEEALVRLFYNASSSFHLLFLLLFSSSLLLIKFLNFIASFTIFQRDHHYEYVSSEYDEEEEEEIQERYSYVHDSSESDHLVADIIGGGETLLFVHNNHSLRTYSSSDEFISPRDSLIEEESEENYSTETLSFHKSPLVSENEEEAEEFPTEDADSVPTSVPDESRPTSPITLNLYKSDSPDNDKNYDADSIFCAEDRVENKKVQEASLTRDERFLVYAPTQLEAKKLIVEEKDEEEIYGDSCTVGSTSKSSSEWRSSINCRDSGTDDPFSSSSRRSCPKWESYTVFQKYDEEMSFQDRISAQKLQEIESLRSIKVSPRSISERIVFKFSSMNKKPGDTRHNPYHEIESAYVAQICSTWEALNWNYKNFQSKRASRGHDADVGCPATIAQRLQQFQVLLQRYVENEPYEHGRRPEIYARVRHLAPKLLLVPEYRESEDDQRDENGFQSKISPASFLMIMEDGIRTFMSFLKADKEKPCQIFAAYFRRNRRALVDPTLLRLIKKVNQKKKMKVKDLRRSNRCLRKRKLKGEEEMEILMALIDLKVVSRVLRMSELSEEQLHWCEEKMSKVRVVEGKLQRDSTPLFFPAH* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00188 591 MobiDBLite consensus disorder prediction 164 183 - -
Lapu4g00188 591 PANTHER DNA LIGASE (DUF1666)-RELATED 12 591 - -
Lapu4g00188 591 Pfam Protein of unknown function (DUF1666) 349 589 IPR012870 -
Lapu4g00188 591 Coils Coil 508 528 - -
Lapu4g00188 591 MobiDBLite consensus disorder prediction 242 280 - -
Lapu4g00188 591 MobiDBLite consensus disorder prediction 118 184 - -
Lapu4g00188 591 MobiDBLite consensus disorder prediction 245 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00188 Lapu-Chr4 1877431 1880715 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00188 - - gmx:100786564 919.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu4g00188 4 1877431 1880715 Lapu4g00188 4 1877431 1880715 ECH
Lapu3g03833 3 61871212 61874206 Lapu4g00188 4 1877431 1880715 PCT