Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03833 ATGCTGCTATGTCCCAAAGAAGATGCACTTGTTAAACTATTCTACAATGTCTCAAGCCCTTTCCACCTTCTCTTTCTCCTTCTCTTCTCCTCTGCCATTTTCCTTCTCACCTTCTTAACCTTCACTGGCAGATACCCCTTTATCCAAAGGGATCAAGAATATGAATATGTGTATACCGAGGATGAAGAGGAAGAAGAAGAAGAAACTCAAGAAGGGTATTCTTGTGTTGATTCTACTGAGGGAGAAAACAACACCTGTGCGAAGGAAATTCCTGTGTTTGTGCACCATGAGAGACATCAAATGACTCATTCTTATTCGGAAGAATTCATAAGCCCCAGGGAGAGCTTGAATGAAGAGTCAGAAGAAAAGCATTATTCTGAAACGCTGTCTCTCCATAAGTCACCACAAGTTTCTGACTTTGACAATGAAGAGGCTGAAACGGTTGAAGAAGACTTTGCAGCAAGAGATTCTGATTCTGTTCCAAATTCAGCCCAACTTGAAAGCAGGACCACCTCCCCCCTCAACCTCAAGCTCAACGCGTTCAAAGGAAACAAAAACCATGATGACGATCACGTTAGCGTTGAAATTATTAAAAACAAGAAGGTGCAAGAGCCAAACCCTGCAAGGGATGAGAGATTCTTTGTTTTTGCTTCTACTCAGTTGCAGAGTAAGAAGTTGATGGTTGAAGAGAAGGATGATGAGTCCTCTAAATGGAAGAGCTCCATGAATTGCAGGGATTCCGAGACTGAAGATGCATTTTCTTCCTCATCCAGAAGAAGTTGCCCCAAGTGGGAATCATACACTTTGTTCCAAAAATATGATGAAGAAATGGCAATCTTAGACAGAATTAGTGCACAGAAACTTCATGAAACTGAGTCATTAAGGTCGATCCAAATGTCTCCAAGATCAATGTCAGAGCGTATTGTGTACAAGTTTCAGACTATAAATAAAAAGCCTGCTGATGTTGGTCACAACCCATATCGAGAACTAGAGGCTGCATATGTAGCACAAATTTGTTTAACATGGGAAGCCCTTAGTTGGAACTACAAAAATTTTCGTTCCAAACATGCTTCACGCCAGGATCATGATACCGGCTGTTCTGCCACAGTTGCTCAGCAATTCCAGCAGTTTCAGGTTTTGTTACAGAGATACATTCAGAATGAGCCTTATGAGCAGGGTAGAAGGCCTGAAATCTACGCTAGAATGAGACTTTTGGCACCCAAATTGCTCCTAGTGCCAGAATATCAAGATTCAGAGGAGGATCAGAAGGATGATGGTTTTCAATGCAAAATATCATCAGCTTCATTTCTAAAGATAATGGAGGATGGGATCAAAACATTCATGAATTTTCTGAAAAATGATAAAGAGAAACCCTGTCAGATCCTAGCAGCCTACTTTAGGAGAAACCAAAGAGGAACAGTTGATCCAACACTGCTCCGACTAATGAAGAAGGTTAATCAAAAGAAGAGGGTGAAGGTTAAGGATCTTAACCATGCAGGCAAATGCTTGAGGAAGAGAAAGTTAAAGGTAGAGAAGGATATGGATATTTTGATGGCTCTCACAGACCTAAAAGTGGTGTCAAGGGTTTTAAGAATGAATGACTTGAGTGAAGAGCAGTTGCACTGGTGTGAGGAGAAGATGAGCAAAGTGAGAATCATGGAAGGGAAGCTTCAAAGAGATTATTCCACCCCACTTTTCTTTCCCTCACATTGA 1713 0.4121 MLLCPKEDALVKLFYNVSSPFHLLFLLLFSSAIFLLTFLTFTGRYPFIQRDQEYEYVYTEDEEEEEEETQEGYSCVDSTEGENNTCAKEIPVFVHHERHQMTHSYSEEFISPRESLNEESEEKHYSETLSLHKSPQVSDFDNEEAETVEEDFAARDSDSVPNSAQLESRTTSPLNLKLNAFKGNKNHDDDHVSVEIIKNKKVQEPNPARDERFFVFASTQLQSKKLMVEEKDDESSKWKSSMNCRDSETEDAFSSSSRRSCPKWESYTLFQKYDEEMAILDRISAQKLHETESLRSIQMSPRSMSERIVYKFQTINKKPADVGHNPYRELEAAYVAQICLTWEALSWNYKNFRSKHASRQDHDTGCSATVAQQFQQFQVLLQRYIQNEPYEQGRRPEIYARMRLLAPKLLLVPEYQDSEEDQKDDGFQCKISSASFLKIMEDGIKTFMNFLKNDKEKPCQILAAYFRRNQRGTVDPTLLRLMKKVNQKKRVKVKDLNHAGKCLRKRKLKVEKDMDILMALTDLKVVSRVLRMNDLSEEQLHWCEEKMSKVRIMEGKLQRDYSTPLFFPSH* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03833 570 PANTHER DNA LIGASE (DUF1666)-RELATED 13 570 - -
Lapu3g03833 570 Pfam Protein of unknown function (DUF1666) 329 568 IPR012870 -
Lapu3g03833 570 MobiDBLite consensus disorder prediction 112 129 - -
Lapu3g03833 570 MobiDBLite consensus disorder prediction 104 145 - -
Lapu3g03833 570 MobiDBLite consensus disorder prediction 60 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03833 Lapu-Chr3 61871212 61874206 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03833 - - gmx:100776190 939.488
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03833 3 61871212 61874206 Lapu3g03833 3 61871212 61874206 ECH
Lapu3g03833 3 61871212 61874206 Lapu4g00188 4 1877431 1880715 PCT