Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00176 ATGATGAGTTCGGCGGCGAGGGTGCCCAAGCTGGGCTCCTTCCGTCACAGCTTCGCCGAGAAGAAGGAGAGGCTGCTCTCCATGAAGGGCGGCGGATACTCCCAAATCGGGATCGCGCTGCCGGAGTCCGACGAGGAGGACCACTGGCCCCGGAGGCCATGCTGCTCATACCGCGCTGTCTCGGACGGGATCGTCGGCGCGTGGAAGAGCGCGAAGCGCGTGGCGGCGAGAGCGTGGGAGATGGGGATGTCTGATCCCAGGAAGATCATATTCTCCGCGAAAATGGGGCTCGCTCTCATTCTCCTTTCGCTTCTGATTTTCCTCAAAAAGCCCTTCGAGGACGTTAGTCGATACTCCGTTTGGGCCATTCTCACTGTCGTCGTGGTTTTCGAATTCAGCATAGGGGCAACTCTTAGCAAAGGGCTTAACAGAGGATTGGGAACTTTGTTAGCTGGAGGACTAGCTTTGGGAATGGGAATTTTATCACAATTGGCTGGAAAATGGGAAGAGCTAATCATAACTGTTAGCATCTTCACTGTAGGATTTTGTGCCACATATGCAAAACAATATCCAACGATGAAGGCTTATGAATATGGTTTCCGTGTGTTCTTGATCACCTATTGCTACATTATTGTATCCGGGTATCGAACAGGAGAGTTTGTTCAAACAGCTATAAATAGATTTTTGCTCATTGCACTCGGAGCTGCTGTGGCTCTGGGGATAAATGTATGTATATATCCAATATGGGCTGGTGAAGATCTGCATAATCTTGTGGCAAAAAATTTCGTGGGCGTTGCTACATCATTGGAAGGCGTTGTAAATAGCTATCTTAATTGTGTTGAATATGAGAGAGTGCCTTCAAAAATTCTTACATATCAAGCTGCAGAAGATGTGGTTTACAAAGGCTACAGATCAGCTGTTGAATCTACAAGCACAGAGGACACATTGATGGGTTTTGCTGTATGGGAGCCACCTCATGGTAGGTACAAAATGCTTAGATATCCATGGCAAAATTATGTGAAAGTAAGTGGGGCTCTAAGGCATTGTGCATTTATGGTCATGGCTATGCATGGGTGTATACTGTCTGAAATACAGGCACCACCAGAGAAGAGACAAGTCTTTAGAAGGGAGCTTCAGAAGGTAGGTTCTGAAGGGGCGAAAATTCTAAGGGAACTTGGAAACAAAGTAAAAAAAATGGAGAAACTAGGCGAGGAAGACATTCTTTATGAAGTACACGAGGCAGCAGAAGAATTGCAGCAGAAGATTGACAAAAAATCCTTCCTCCTTGTAAATTCAGAGAGCTGGGAAATCGGTAACCGGCCAAGAGGGGAGGGTGATCCTCAAGATCTCTTGAACGTCGATGAAGAAAGACACTTTTTAGAGTACAAGTCTCTCAGTGAAGCTGTGCTTGATCTCAGAGCTGTCAAAGTTCCAAAAAGTTGGGGAGAACAAGCAACTCCTCCTGACAGGGCACCTGCAGTGCCTGCAGGTGTTGGTGATGAAAATATGTTCAGGAAACAGATATCCTGGCCTGCTCATATTTCCTTCAAAGCAGACGCAGTGACAAAAGAGGAAGAATCTAAAACGTTTGAAAGTGCTAGTTCTTTGTCTCTAGCCACTTTTACATCCCTTCTAATTGAGTTTGTGGCAAGGCTCCAGAACCTTGTGGATTCTTTTGAAGAGTTAGGTGAGAGAGCAAAATTTAAGGACCCTCTTGAGCAAGCACCAGCAACATCTGGTGGGTTTTGGAACCGGTTGTGTAATGGTTTGACGGCCAAGGATTGA 1785 0.4639 MMSSAARVPKLGSFRHSFAEKKERLLSMKGGGYSQIGIALPESDEEDHWPRRPCCSYRAVSDGIVGAWKSAKRVAARAWEMGMSDPRKIIFSAKMGLALILLSLLIFLKKPFEDVSRYSVWAILTVVVVFEFSIGATLSKGLNRGLGTLLAGGLALGMGILSQLAGKWEELIITVSIFTVGFCATYAKQYPTMKAYEYGFRVFLITYCYIIVSGYRTGEFVQTAINRFLLIALGAAVALGINVCIYPIWAGEDLHNLVAKNFVGVATSLEGVVNSYLNCVEYERVPSKILTYQAAEDVVYKGYRSAVESTSTEDTLMGFAVWEPPHGRYKMLRYPWQNYVKVSGALRHCAFMVMAMHGCILSEIQAPPEKRQVFRRELQKVGSEGAKILRELGNKVKKMEKLGEEDILYEVHEAAEELQQKIDKKSFLLVNSESWEIGNRPRGEGDPQDLLNVDEERHFLEYKSLSEAVLDLRAVKVPKSWGEQATPPDRAPAVPAGVGDENMFRKQISWPAHISFKADAVTKEEESKTFESASSLSLATFTSLLIEFVARLQNLVDSFEELGERAKFKDPLEQAPATSGGFWNRLCNGLTAKD* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00176 594 Pfam Aluminium activated malate transporter 79 563 IPR020966 GO:0015743
Lapu4g00176 594 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 64 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00176 Lapu-Chr4 1735142 1741852 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00176 10 571 Miscellaneous Gene Families AT3G18440 63.574 0.0 727
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00176 K25841 - gmx:100810157 1039.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu4g00176 4 1735142 1741852 Lapu3g03828 3 61767266 61777876 ECH
Lapu4g00176 4 1735142 1741852 Lapu4g00176 4 1735142 1741852 ECH