Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03828 ATGCAGTACACCGTATGTCTATACACTAAAAAACATGTCAACACAAAGTTCTTCCAACAGAAAAACATTTATATCAATCGTCTTAGTTCCCACTTTCTCTGGTTAGAAAAAATGGCTCCGAATTTGGTGAAATCGGGGTCGTTCCGTCACGGTTTGGCGGAGAAGAAGGAGAGGCTTCTCTCGGGGAAGAGTAATAATATTTCTCAGATAGGGATTGGCATTATGACGCAAGAGGAAGAGCAATCGAGGATGGTGAAGTGGTGGAACACAGTTAAGCGTGTAAGTGGGAAAGCGTGGGAAATGGGTCGCTCTGATCCAAGGAAGGTTATCTTTTCTGCAAAAACGGGTCTTGCTTTGACCCTTCTTTCACTTTTGATTTTCCTCAAAGAACCCTTCAAGGATATGAGCCTCTACTGTGTCTGGGCCATTCTCACTGTTGTCGTAGTCTTCGAATTCAGCATAGGGGCAACTCTGAGCAAGAGCTTAAATGGTGGATTGGGGACCTTGTTGGCTGGGGCACTTTCTCTGGGGATGGCAGAGTTATCAACATTGGCTGGAAAATGGGAAGAGCTTATAATTATTATATGCATCTTCATTGTAGGATTTTCTGCCACCTATACAAGACTATATCCTACTTTTAAGCCTTATGAATATGGGTTCCGCATGTTCTTGATCACGTACTGTTTCATTACTGTATCCGGGTATCAGACAGGAGAATTTGTCGATACCGCTATAAATAGACTTGTCCTCATTGCACTCGGTGCTGCGGTATCTTTGGGAGTAAATATCTGTATATACCCTATCTGGGCTGGAGAGGATCTGCATAATCTTGTCGTAAAAAATTTCATGGATGTTGCATCATCTTTGGAAGGTGTTGTCAATAACTACCTTCATTGTGTTGAATATAAGAAGGTGCCATCTAAAATTCTTACTTACCAAGCTGCTGATGATCCAATTTACAATGGCTACAGATCGGTTGTTGAATCGACAAGTAAAGAAGATGCATTGATGGGTTTTGCTGTCTGGGAACCACCGCATGGTCATTACAAAATGCATAGATATCCATGGAAGAATTATGTGAAATTAAGCGGGGCTCTAAGGCATTGCGCATTTGTGGTCATGGCTATGCATGGATGCATACTTTCTGAAATACAGGCCCCAGCAGAGAAGAGACAAGTTTTCCGTAGTGAGCTTCAAAGAGTTGGTTCTGAAGGGGCAAAAGTGTTACGAGAACTTGGAAACAAAGTTCAAAAGATGGAGAAACTAGACCAGGAAAACTTGCTGTATGAAGTGCACGAGGCAGCAGAGGAATTGCAACAGAAGATTGATAAAAAATCATACCTTCTTGTGAATTCAGAGAGCTGGGAAATTGGAAACCGCCCAATAGAGGATGAGGAGAGTGATCCTCAACAAGAAGATCTCTTTGACATACACGAAGAACGAAAATTTCTTGAGCACAAGTCTCGTAGTGAAGCAGTACTTGATCTCAGTACAGTTGAAGTTCCACATTCTTGGGATGGAAATTTAACTCTAGGCAATAACCCTGCTGTGCCTGCAACCGATGCCTCTCAAAACATGTCTAAGAAACAGATATCTTGGCCTGCTCATATTTATTATCATAAATCAAATGCCGAGGTCAAAGAGGGACAAGAACTAAAAACTTACGAAAGTGCTAGCACACTATCTTTAACAACATTTTCATCGCTTCTGATTGAATTTGTAGCAAGGCTTCAAAACCTGGTGGATTCATTTGAAGAACTAAGTGAAATAGCAAACTTTGCTGAGCCCCTTGAGCAACAAGAACCATCAACATCCCATGGGTTTTGGACTAGGTTGTTTAACTGCTGA 1848 0.4172 MQYTVCLYTKKHVNTKFFQQKNIYINRLSSHFLWLEKMAPNLVKSGSFRHGLAEKKERLLSGKSNNISQIGIGIMTQEEEQSRMVKWWNTVKRVSGKAWEMGRSDPRKVIFSAKTGLALTLLSLLIFLKEPFKDMSLYCVWAILTVVVVFEFSIGATLSKSLNGGLGTLLAGALSLGMAELSTLAGKWEELIIIICIFIVGFSATYTRLYPTFKPYEYGFRMFLITYCFITVSGYQTGEFVDTAINRLVLIALGAAVSLGVNICIYPIWAGEDLHNLVVKNFMDVASSLEGVVNNYLHCVEYKKVPSKILTYQAADDPIYNGYRSVVESTSKEDALMGFAVWEPPHGHYKMHRYPWKNYVKLSGALRHCAFVVMAMHGCILSEIQAPAEKRQVFRSELQRVGSEGAKVLRELGNKVQKMEKLDQENLLYEVHEAAEELQQKIDKKSYLLVNSESWEIGNRPIEDEESDPQQEDLFDIHEERKFLEHKSRSEAVLDLSTVEVPHSWDGNLTLGNNPAVPATDASQNMSKKQISWPAHIYYHKSNAEVKEGQELKTYESASTLSLTTFSSLLIEFVARLQNLVDSFEELSEIANFAEPLEQQEPSTSHGFWTRLFNC* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03828 615 Pfam Aluminium activated malate transporter 99 588 IPR020966 GO:0015743
Lapu3g03828 615 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 80 599 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03828 Lapu-Chr3 61767266 61777876 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03828 44 596 Miscellaneous Gene Families AT3G18440 59.658 0.0 670
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03828 K25841 - gmx:100813638 920.613
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu4g00176 4 1735142 1741852 Lapu3g03828 3 61767266 61777876 ECH
Lapu3g03828 3 61767266 61777876 Lapu3g03828 3 61767266 61777876 ECH