Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00164 ATGATGCAACGGTTGGTTGATCATGTTCTTGCTGTAACTAAAGAGTCCGTGAAGGCGTTTACTTATGAGTCCTTAAATAATATTGTGAGGCTAATCAATGGAGTATCTGCCCTTTTGTTGGCATTCTTACCTGGGAAAGCTAATATACTTGAAGGTATCCATGGTTGGGAACTCAGGCCAACTTTCCGTGGACCGCGATTTCCGCGTTGGATGGAGAATGGCGTATCCTCTTTCAACCAGTTTGTCCATGATCTTTCTATGGATTCTGATAATTCAAGCCTTGAATACTCATCCGAAGAAGAAGATAGTGACATATATAGTGATGGACTGGAATACCCTCCATCTCCTGCATCTGAGAGTTCTAGAACCTCAGAAGCTGGTACTACCAAATTCAGTAGGCATCAGAAGGATTGGATCCAATATATCTTACTTTCAGTTTTGCTTCCTTTAAAGTTATTGCTGTGGATTCCACTTCATCTTTTCCGGTTAGTTTATTGTGTGGTGTCAAAAGCAATGTCTTTCGCTGGACGTAAGCGTCCTTCTCATTTACGTGCACATAAGAGAGTGCTGAGTATCAAGGAACATATTATCCACCGTGCCACTGATAGGAGACGTGGAGTTGTAGAGGATCTTCATCTAGGCATAGAGTTATCTATAGAAGCTGTCTTTGATGTTGTTCACAAGGCAGCACATCTTCTTCTTTCCCCTTCAGAAGCTTTTGGGGCACTATTTAGGTTTTTTTCATCACGTGAAAGTGCTATTAAAGAAGATCATGATGGCATTGAGGATGTCTCCATATATAAAGATACATTAGGAGAAAATGACCCAAAACCCATAGAGAGAAATGTCAAGTATCAGCCTCTGAATACAGATGCTCGGACATGTCAGGATGTAATAACGGACCTTGGGTATCCATATGAAGCCATTCGTGTGATCACTTCTGATGGATATATTCTTCTTTTGGAAAGAATACCGAGGCGAGATTCAAGAAAAGCTGTTTATCTTCAGCATGGGGTTTTGGATTCATCAATGGGTTGGGTATCTAATGGAGTTGTTGGCTCTCCAGCTTTTGCAGCATACGATCAAGGTTATGATGTATTTCTGGGGAATTTTCGTGGTTTGGTTTCACGGGAACATGTCAACAAGAACATATCATCACGTCAATACTGGCGGTATTCCATCAATGAGCATGGGACTAAGGATATTCCTGCTATGATAGAAAAAATCCATGAAGTAAAAACTGCTGAGTTGAGGCTTACTAAACCTGATATAGAGGATGAAACTGATGATGATCAGCTTTACAAGCTTTGTGCCATTTGCCATAGTTTGGGAGGAGCTGCTGTGATGATGTATGTTATCACTCGAAGGATAGAAGGGAAACCCCATAGACTTTCAAGATTGGTTTTGTTATCACCGGCCGGATTTCATGATGACTCTAACATGGTTTTTTCCATGGCTGAACTTCTACTTGTTTTATTGGCACCTGTTTTGTCTCTTCTTGTTCCTGCCTTCTATATACCAACCAGATTTTTTCGTATGCTTGTGAACAAGTTAGCACGGGATCTGCATAACCTACCTGCAGTTGGAGGGTTGGTTCAAACTTTAATGAGTTATGTTGTTGGTGGAGACAGCTCAAACTGGGTTGGAGTTTTAGGATTACCACACTATAACATGAATGACATGCCAGGAGTATCTTTTCGTGTTGCTCTGCATCTTTCGCAGATGAAGCGAAGTGGAAGGTTCAGAATGTTTGATTATGGTAGTGCATCAGCCAACATGGAAGTGTATGGTTCACCTATGCCTTTGGACTTGGGTGCACACTATGGACTCATAGACATTCCTGTTAATCTTGTTGCTGGACAGAAGGACAAAGTGATAAGACCTTCAATGGTGAAGAGACACTATAAATTGATGAAGGGTGCTGGGGTAGATGTTTCATATAATGAGTTTGAATATGCTCATCTAGACTTCACCTTCTCCCACCGTGAAGAACTCTTGTCATATGTTATGTCATGCTTGCTGCTTGTGGATCCTAATCCAAAACATCAAGTGAATCAAAGGGGTGTGAGGTCAAGAAGAAAAGGAGGGCAAGTTGCAACCAGTGGTTGA 2109 0.4139 MMQRLVDHVLAVTKESVKAFTYESLNNIVRLINGVSALLLAFLPGKANILEGIHGWELRPTFRGPRFPRWMENGVSSFNQFVHDLSMDSDNSSLEYSSEEEDSDIYSDGLEYPPSPASESSRTSEAGTTKFSRHQKDWIQYILLSVLLPLKLLLWIPLHLFRLVYCVVSKAMSFAGRKRPSHLRAHKRVLSIKEHIIHRATDRRRGVVEDLHLGIELSIEAVFDVVHKAAHLLLSPSEAFGALFRFFSSRESAIKEDHDGIEDVSIYKDTLGENDPKPIERNVKYQPLNTDARTCQDVITDLGYPYEAIRVITSDGYILLLERIPRRDSRKAVYLQHGVLDSSMGWVSNGVVGSPAFAAYDQGYDVFLGNFRGLVSREHVNKNISSRQYWRYSINEHGTKDIPAMIEKIHEVKTAELRLTKPDIEDETDDDQLYKLCAICHSLGGAAVMMYVITRRIEGKPHRLSRLVLLSPAGFHDDSNMVFSMAELLLVLLAPVLSLLVPAFYIPTRFFRMLVNKLARDLHNLPAVGGLVQTLMSYVVGGDSSNWVGVLGLPHYNMNDMPGVSFRVALHLSQMKRSGRFRMFDYGSASANMEVYGSPMPLDLGAHYGLIDIPVNLVAGQKDKVIRPSMVKRHYKLMKGAGVDVSYNEFEYAHLDFTFSHREELLSYVMSCLLLVDPNPKHQVNQRGVRSRRKGGQVATSG* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00164 702 Pfam Partial alpha/beta-hydrolase lipase region 296 350 IPR006693 GO:0006629
Lapu4g00164 702 MobiDBLite consensus disorder prediction 104 127 - -
Lapu4g00164 702 FunFam Gastric triacylglycerol lipase 284 674 - -
Lapu4g00164 702 PANTHER LYSOSOMAL ACID LIPASE-RELATED 193 670 - -
Lapu4g00164 702 Gene3D alpha/beta hydrolase 284 673 IPR029058 -
Lapu4g00164 702 MobiDBLite consensus disorder prediction 682 702 - -
Lapu4g00164 702 SUPERFAMILY alpha/beta-Hydrolases 293 670 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00164 Lapu-Chr4 1636162 1642004 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00164 2 685 Lipid Metabolism Gene Families AT1G18460 68.314 0.0 933
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00164 - - gmx:100785512 1228
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu4g00164 4 1636162 1642004 Lapu4g00164 4 1636162 1642004 ECH
Lapu3g03822 3 61699396 61703670 Lapu4g00164 4 1636162 1642004 PCT