Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03822 ATGTCAAGATGTTATAACAGAACTAGGGTACAGTATCCATACGAAGCTATTCATGTGATCACTGCCGATGGATATGTTCTTCTTCTAGAAAGAATTCCCAGGCGAGATGCACGTAAAGCTGTTTATCTTCAGCATGGAATCTTTGATTCATCAATGGGTTGGGTATCTAACGGTGTTGTTGGCTCTCCCGCCTTTGCAGCCTATGATCAAGGGTATGATGTATTTCTGGGAAATATTCGTGGTTTGGTTTCTAGGGAACATGTCAACAAGAATATCTCCTCCCGTGAATACTGGAAGTACTCCATCAATGAATATGGGACGGAGGATATTCCTGCTTTGATTGAGAAAATCCATCAAGTAAAAACTGCTGAATTGAGGCTTCGTAAGCTTGATATTGAGGAGGAAAGTAATGATGATCAGGTTTACAAGCTCTGTGCAATTTGCCATAGTTTGGGAGGAGCTTCTATGTTAATGTATGTTATTACGCGTAGGTTAGAAGCAAAGGCCCATAGACTTTCAAGATTGGTTTTGTTATCACCTGCTGGTTTTCATCATGACTCAAACCTACTCTTTTCTGTGGTGGAGCATGTGTTGGTTTTGCTGGGCCCTATTTTGTCTCGTATTTTCCCAGCCTTCTATGTACCAACCAGGTTTTTCCGTATGCTTGTTAACAAGTTAGCTAGGGACCTGCAAAACCTACCTGCAGTTGGAGGATTGGTTCAAACTTTGTTAGGTTATGTTGCTGGCGGGGACAGCTCAAATTGGGTTGGGGTTTTAGGGTTACCACATTACAACATGAATGATATGCCAGGAATATCGTTTGGGGTTGCTCTCCATCTTGCACAGATAAAGCGTACTGGAAGATTTAGAATGTTTGATTATGGGAGAGCATATAATATGAAAATATATGGTTCCCCTGAGCCTTTGGACTTGGGGGAACACTATGGAGTCATCGACATTCCTGTTGATCTGGTTGCTGGTCAGAGAGACACAGTAATACGATCTTCAATGGTAAGGAGACACTTTAAATTGATGAAGGATGCTGGTGTGGATGTGTCGTATAATGAGTTTGAATACGCTCATTTGGATTTTACCTTCTCTCACCGTGAAGAGCTTTTGTCATATGTTATGTCACGTTTGCTGCTTGTGGAGCCCAATTCAAAGGATCATCAAGTAAATCAAAGGGCTCCAAGATGGAGGAGGAAAGGACAGGCTTCGATGAGTGGGTAA 1230 0.4203 MSRCYNRTRVQYPYEAIHVITADGYVLLLERIPRRDARKAVYLQHGIFDSSMGWVSNGVVGSPAFAAYDQGYDVFLGNIRGLVSREHVNKNISSREYWKYSINEYGTEDIPALIEKIHQVKTAELRLRKLDIEEESNDDQVYKLCAICHSLGGASMLMYVITRRLEAKAHRLSRLVLLSPAGFHHDSNLLFSVVEHVLVLLGPILSRIFPAFYVPTRFFRMLVNKLARDLQNLPAVGGLVQTLLGYVAGGDSSNWVGVLGLPHYNMNDMPGISFGVALHLAQIKRTGRFRMFDYGRAYNMKIYGSPEPLDLGEHYGVIDIPVDLVAGQRDTVIRSSMVRRHFKLMKDAGVDVSYNEFEYAHLDFTFSHREELLSYVMSRLLLVEPNSKDHQVNQRAPRWRRKGQASMSG* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03822 409 Pfam Partial alpha/beta-hydrolase lipase region 8 58 IPR006693 GO:0006629
Lapu3g03822 409 PANTHER LYSOSOMAL ACID LIPASE-RELATED 9 381 - -
Lapu3g03822 409 SUPERFAMILY alpha/beta-Hydrolases 8 374 IPR029058 -
Lapu3g03822 409 Gene3D alpha/beta hydrolase 2 381 IPR029058 -
Lapu3g03822 409 FunFam Gastric triacylglycerol lipase 4 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03822 Lapu-Chr3 61699396 61703670 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03822 8 386 Lipid Metabolism Gene Families AT1G18460 75.789 0.0 626
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03822 - - gmx:100779931 724.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03822 3 61699396 61703670 Lapu3g03822 3 61699396 61703670 ECH
Lapu3g03822 3 61699396 61703670 Lapu4g00164 4 1636162 1642004 PCT