Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03561 ATGGCTTTGCAGGACAGGTTAGACAAGTTCAAGAAACAGCAAGAAAGGTGCCAAACGACACTGTCAAGCATTGCAGCAAGTAAAGCCGCTGCAAGCCAAAAGTCTGCCGCGCATGGCTCGGCCAATGGAAGAAACGCGCCCCCTGCGGTTAAGTTTTCGAACGACACGGAGAGACTTCAGCATATTAACAGCATACGTAAAGCCCCTGTGGGTGCTCAGATGAAGCGTGTTATCGATCTCCTTCTAGAGACAAGACAAGCCTTAACACCGGAGCAGATAAACCAGGCATGCTATGTTGACATAAAGGCTAACAAAGATGTCTTTGAAAATCTTAGAAAAAATCCAAAAGTGAATTATGATGGCCAGCGATTCTCTTACAAGTCAAAGTATGGTCTTAAGGACAAAACAGAACTTCTTCAACTGATACGTAAGTATCCTGAGGGCCTTGCTGTTATTGACTTAAAGGATGCTTATCCCACTGTGATGGAAGACTTGCAGGCTTTGAAAGCTGCAGGGCAGATTTGGCTGCTGTCCAACTTTGATTCACAGGAAGACATTGCCTACCCTAACGACCCCAAATTGCACATTAAGGTGGATGATGATCTAAAACAGCTTTTCCGGAGTATTGAATTGCCTCGTGATATGATTGATATAGAGAAGGATCTACAAAAGAATGGAATGAAGCCCGCCACCAACACTGCAAAGAGGAGGAGTGCAGCACAAATTCAAGGCATTTCTTCCAAGCCCAAGCCTAAGAAGAAGAAGAGTGAAATCAATAAGAGAACGAAGCTGACGAATGCCCATCTTCCAGAGCTTTTTCAAAACCTGAACAATTCCTGA 840 0.444 MALQDRLDKFKKQQERCQTTLSSIAASKAAASQKSAAHGSANGRNAPPAVKFSNDTERLQHINSIRKAPVGAQMKRVIDLLLETRQALTPEQINQACYVDIKANKDVFENLRKNPKVNYDGQRFSYKSKYGLKDKTELLQLIRKYPEGLAVIDLKDAYPTVMEDLQALKAAGQIWLLSNFDSQEDIAYPNDPKLHIKVDDDLKQLFRSIELPRDMIDIEKDLQKNGMKPATNTAKRRSAAQIQGISSKPKPKKKKSEINKRTKLTNAHLPELFQNLNNS* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03561 279 PIRSF TFIIE-beta 1 278 IPR016656 GO:0005673|GO:0006367
Lapu3g03561 279 MobiDBLite consensus disorder prediction 226 245 - -
Lapu3g03561 279 MobiDBLite consensus disorder prediction 28 55 - -
Lapu3g03561 279 PANTHER TRANSCRIPTION INITIATION FACTOR IIE, BETA SUBUNIT 1 277 IPR016656 GO:0005673|GO:0006367
Lapu3g03561 279 MobiDBLite consensus disorder prediction 225 279 - -
Lapu3g03561 279 Pfam TFIIE beta subunit core domain 72 130 IPR003166 GO:0006367
Lapu3g03561 279 Pfam TFA2 Winged helix domain 2 133 190 IPR040501 -
Lapu3g03561 279 ProSiteProfiles TFIIE beta central core DNA-binding domain profile. 58 133 IPR003166 GO:0006367
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03561 Lapu-Chr3 59049326 59052645 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03561 K03137 - gmx:100802433 502.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03561 3 59049326 59052645 Lapu3g03561 3 59049326 59052645 ECH
Lapu2g00277 2 2240452 2244675 Lapu3g03561 3 59049326 59052645 PCT