Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00277 ATGGCGTCCCAGGAAAAGGCAAACAGGTTTAAAAGACAGCCAGAGAAGAATTCCTCTGCTTCAAACAATGGAAGAGCTCCGGGTGCTGTCAAATTCTCTACCGACACGGAAAGACTTCAACATGTTAATAGCATACGCAAAGCCCCCGTAGGGGCTCAGATGAAGCGTGTTATTGATCTCCTTTTTGAGACCCGAAAGGCTTTAACGATGGAGCAAATAAATGAAGCGTGTTACGTGGACATGAGAGCTAATAAAGATGTTTTTGAGAGTATGAGGAAAAACCCAAAAGTAAAATATGATGGGGAAAGATTCTCTTACAAGTCGAAGCATGATGTTAGGGACAAAAGTCAGCTGCTTTTCCTGGTACGTAAGTTTCCAGAGGGCATTGCTGTTGTTGACCTAAAAGATTCTTACCCAACTGTGATGGAAGACTTGCAGGCTTTGAAAGCTTCAAGGGAGGTTTGGCTGTTGTCTAACTTCGACTCACAAGAGGACATTGCCTACCCGAATGATCCTAAAGTGCCCATGAAGGTGGATGATGACCTAAAACAGCTTTTTCGGGGGATTGAATTGCCTCGTGATATGATTGACATAGAGAGGGATCTACAAAAAAATGGAATGAAGCCTGCTACCAACACTGCAAAGAGGAGGAGTGCAGCGCAAATGGAAGGCATTTCAACAAAGCCTAAACCTAAGAAGAAAAAGAATGAAATCACTAAGAGGACCAAGCTGACTAATGCCCATCTTCCGGAGCTTTTTCGGAATTTAAATAATTCCTGA 780 0.4308 MASQEKANRFKRQPEKNSSASNNGRAPGAVKFSTDTERLQHVNSIRKAPVGAQMKRVIDLLFETRKALTMEQINEACYVDMRANKDVFESMRKNPKVKYDGERFSYKSKHDVRDKSQLLFLVRKFPEGIAVVDLKDSYPTVMEDLQALKASREVWLLSNFDSQEDIAYPNDPKVPMKVDDDLKQLFRGIELPRDMIDIERDLQKNGMKPATNTAKRRSAAQMEGISTKPKPKKKKNEITKRTKLTNAHLPELFRNLNNS* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00277 259 PANTHER TRANSCRIPTION INITIATION FACTOR IIE, BETA SUBUNIT 6 257 IPR016656 GO:0005673|GO:0006367
Lapu2g00277 259 Pfam TFIIE beta subunit core domain 52 112 IPR003166 GO:0006367
Lapu2g00277 259 MobiDBLite consensus disorder prediction 1 33 - -
Lapu2g00277 259 MobiDBLite consensus disorder prediction 208 259 - -
Lapu2g00277 259 ProSiteProfiles TFIIE beta central core DNA-binding domain profile. 38 113 IPR003166 GO:0006367
Lapu2g00277 259 PIRSF TFIIE-beta 1 258 IPR016656 GO:0005673|GO:0006367
Lapu2g00277 259 Pfam TFA2 Winged helix domain 2 113 170 IPR040501 -
Lapu2g00277 259 MobiDBLite consensus disorder prediction 14 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00277 Lapu-Chr2 2240452 2244675 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00277 K03137 - gmx:100788089 462.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g00277 2 2240452 2244675 Lapu3g03561 3 59049326 59052645 PCT