Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03504 ATGGGTATGTGGAAATTGGGTTTTTTGGGGTTTCTTTGTGCCTATTTTCTCTTTACAATTGGTGCTGTGGAGCTGGGCAGGAACCAACCAACTGAAAGAATTTCAGGTAGTGCTGGTGATGTACTGGAAGATGATCCAGTGGGAAGGTTGAAGGTTTTTGTATATGAACTTCCAAGTAAGTATAATAAGAAAATTCTGCAAAAAGACCCGAGATGCCTCAACCATATGTTTGCTGCTGAAATCTTCATGCACCGGTTTCTCTTATCTAGCCCTGTCCGAACCCTTAATCCTGAAGAGGCTGACTGGTTTTATACCCCTGTATACACCACTTGTGACTTGACACCAAATGGCCTCCCTTTACCCTTTAAGTCGCCACGAATGATGAGAAGTGCCATACAACTTATTTCTTCAAACTGGCCTTATTGGAACCGCACAGAGGGGGCAGATCACTTCTTTGTGGTTCCTCACGACTTTGGGGCATGTTTTCATTACCAGGAAGAGAAGGCAATTGAAAGAGGGATTCTTCAACTGCTTCGGCGTGCTACATTGGTTCAAACATTTGGACAGAGGAATCATGTATGCTTGAAAGAGGGCTCAATTACCATTCCTCCATATGCTCCACCACAGAAAATGCATAGTCACCTAATTCCTGATAAGACTCCCAGGTCAATTTTTGTATACTTCCGAGGACTTTTTTATGATGTTGGCAATGACCCTGAAGGTGGTTACTATGCAAGAGGTGCAAGGGCAGCAGTGTGGGAGAACTTTAAGGACAATCCTCTATTTGACGTTTCCACCGAGCATCCAACCACGTACTACGAGGACATGCAACGAGCCGTGTTTTGCCTATGCCCGCTTGGATGGGCACCTTGGAGCCCAAGATTGGTAGAGGCTGTGATATTTGGTTGCATACCTGTTATTATTGCAGATGATATTGTGCTGCCATTTGCTGATGCAATCCCATGGGAAGAGATAGGAGTGTTTGTTGCTGAGGAGGAGGTTCCAAAGTTGGATACCATACTCACATCTATCTCACCAGAAGTCATATTAAGGAAGCAAAGATTGCTTGCTAACCCTTCCATGAAGCAAGCAATGCTTTTTCCACAGCCTGCTCAACCTGGAGATGCATTCCATCAAGTTTTGAATGGACTGGCACGGAAGCTGCCACATGACAACACCGTGTTCTTGAAACCAGGGGAGAAGATCTTGAATTGGACTGCTGGCCCTGTGGCTGACCTTAAACCTTGGTAA 1251 0.4508 MGMWKLGFLGFLCAYFLFTIGAVELGRNQPTERISGSAGDVLEDDPVGRLKVFVYELPSKYNKKILQKDPRCLNHMFAAEIFMHRFLLSSPVRTLNPEEADWFYTPVYTTCDLTPNGLPLPFKSPRMMRSAIQLISSNWPYWNRTEGADHFFVVPHDFGACFHYQEEKAIERGILQLLRRATLVQTFGQRNHVCLKEGSITIPPYAPPQKMHSHLIPDKTPRSIFVYFRGLFYDVGNDPEGGYYARGARAAVWENFKDNPLFDVSTEHPTTYYEDMQRAVFCLCPLGWAPWSPRLVEAVIFGCIPVIIADDIVLPFADAIPWEEIGVFVAEEEVPKLDTILTSISPEVILRKQRLLANPSMKQAMLFPQPAQPGDAFHQVLNGLARKLPHDNTVFLKPGEKILNWTAGPVADLKPW* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03504 416 Pfam Exostosin family 49 344 IPR040911 -
Lapu3g03504 416 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 48 383 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03504 Lapu-Chr3 58373469 58377306 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03504 K20870 - gmx:100812747 835.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03504 3 58373469 58377306 Lapu3g03504 3 58373469 58377306 ECH
Lapu9g01119 9 24230701 24240690 Lapu3g03504 3 58373469 58377306 PCT