Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02982 ATGCCTTTATATTGTTCCACTTTGGGTGCAAACATGCCACATACCTTAGGACTTGGGAAGAGAAGTGAAAACCACACACATAGCCATATACAAACAACAGATTCCTGCTTCATGTCTCAACAGCATAAACCCCCCAACACTCTCCCAACCCACATTGGTTCTGTTTCAAAATTTGACCAAAGTTTTTCTTCTCCTGTGATGGAGGAGGACCGAAAAATATTTGGTCATGTCTCTGAACCAGACGAATATTGCAGAGAGTTGGATGCTGCTGTTAGAGCAGTTCAGATGTCATGCTTCCTCTGTCAGAAACTGGAAGACACTTTCATTTCGAATTCTCAGATCAATCATCACAATTCACCGCTCGCAGTTGCAGGTTGGAGTGTCAACACAATTGTCAGCTGGATATTGTCTGAATGTTTCGGGAGTGAAAATGTCTCAATTGTAACTGAAAAGGATGTTCAGACCCTATCCAATACTAATACATCAGAACTGTTGGAAGCTGTGGTTAAAACTGTGAATGAATGTCTAGCTGAAGCACCTCGATTTGGGGTTGAGGAGCCAAAATCAACTCTTGGAACTTCAGAGGTTCTTGAAATCATTAGTCGCAGCAACTCACTTGGAAGTCCTTCAGGAAGATTTTGGGCACTTGGCCCTCTTGATATTAAAGAGGGGTCTGCATGTGGCGATCAATATGCTGTAGCTTTGTCACTCATAGAGGATGGAGAAGTGGTGGTTGGAGTTCTTGGCTGTCCTAACTACCCTATGAGAAAGGACTGGTTTAGTTATCATCTCAGCTATCAGAGGATGATATCTATGTTGACTCCTCCAACCTCTGAAACTTGGAATAAAGGTTGTGTAATTTATGCTAAGAGGGGTAGTAAGAAAGCTTGGATCCAACCACTGCTCCATGTCAATAAGAAGTTTGTGTGGCCAAACCATGCAAAACAAGCTTCTGTCTCCACCGTTGACAACCTAGCGTTGGCCACTTTCTGTCAACCAATTAAGAAGGCCAATTCAAGCCACACTTTTACTGAGGGATTGGCTCAGAGTGTTGGTCTCAGTAATCAGCCACTAAGAGTATACAACATGATGAAATATGCGGCAATAGCTTGTGGGCATGCTGAAGTTTTCATGAAGTTTGCAAGGGCTGGTTACAAGGAAAAAATATGGGATCATGCTGCAGGTGCTATCATCATACAAGAGGCTGGAGGCATGGTAACAGATGCTAGGGGGCATCCCCTAGACTTCTCAAAAGGTTTAAACTTAGAAAGCCTTGATCGTGGTATAGTTGCTTGTGCTGGAGCCACATTACATGAAAAGATCATCGATGCAGTAGATGCTAGCTGGGTCTCTTCTTGTCTTTGA 1365 0.4322 MPLYCSTLGANMPHTLGLGKRSENHTHSHIQTTDSCFMSQQHKPPNTLPTHIGSVSKFDQSFSSPVMEEDRKIFGHVSEPDEYCRELDAAVRAVQMSCFLCQKLEDTFISNSQINHHNSPLAVAGWSVNTIVSWILSECFGSENVSIVTEKDVQTLSNTNTSELLEAVVKTVNECLAEAPRFGVEEPKSTLGTSEVLEIISRSNSLGSPSGRFWALGPLDIKEGSACGDQYAVALSLIEDGEVVVGVLGCPNYPMRKDWFSYHLSYQRMISMLTPPTSETWNKGCVIYAKRGSKKAWIQPLLHVNKKFVWPNHAKQASVSTVDNLALATFCQPIKKANSSHTFTEGLAQSVGLSNQPLRVYNMMKYAAIACGHAEVFMKFARAGYKEKIWDHAAGAIIIQEAGGMVTDARGHPLDFSKGLNLESLDRGIVACAGATLHEKIIDAVDASWVSSCL* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02982 454 CDD PAP_phosphatase 86 445 - -
Lapu3g02982 454 SUPERFAMILY Carbohydrate phosphatase 85 446 - -
Lapu3g02982 454 Gene3D - 82 308 - -
Lapu3g02982 454 ProSitePatterns Inositol monophosphatase family signature 2. 390 404 IPR020550 GO:0046854
Lapu3g02982 454 NCBIfam 3'(2'),5'-bisphosphate nucleotidase 84 452 IPR006239 GO:0006790|GO:0008441
Lapu3g02982 454 Gene3D - 318 448 - -
Lapu3g02982 454 PANTHER PHOSPHATASE 76 451 - -
Lapu3g02982 454 FunFam PAP-specific phosphatase HAL2-like 318 451 - -
Lapu3g02982 454 Pfam Inositol monophosphatase family 119 448 IPR000760 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02982 Lapu-Chr3 52954749 52958687 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02982 K01082 - gmx:100306018 746.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g02982 3 52954749 52958687 Lapu6g01209 6 11924090 11928008 PCT