Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02290 ATGAGAAGCTCTTGGTTGAAGAAACAGTCCTTCATAATTGGCCCTAAGCCGCCACTGAGCTGGTTAATCCTGTGCCTGGTAAGTATCCTCGCACTGATTGCAGTGTTGAGTTCTTCTTCTTCTTCTTCTCCTCCGTCCCCTTCTTCTTCGAACACCGATGGTTCAGCGTCTCGCACTGCGGAATCGCTAATCTACACGAACTACAGAAGGATAAAGGAGCAAGCCGCGGTGGATTACTTGGAGCTAAGGAGTGTGTCGAGTGGTGGCGCGAGGCTGAAGGAGGTGGGGCTTTGCGGCAAGGAAAGGGAGAATTTCGTGCCGTGTCACAATGTGTCTGCGAATTTGATTTCGGGCTTTAAAGAGGGAGAGGAGTTTGATCGGCATTGCGAGGTGTATAAGGTAACAGAGAGGTGTTTGGTTCGGCCTCCCAAGGAATACAAGACTCCGTTGCGATGGCCGAGTGGGAGGGATGTTATATGGAGCGCAAATGTGAAGATCACCAAAGATCAGTTTCTTTCCTCTGGGAGTATGACCAAAAGGTTGATGCTATTAGAAGAGAATCAAATCGCCTTTCACTCTGAGGATGGGTTGATCTTTAACGGTGTGAAAGATTATGCTCGCCAACTTGCAGAGATGATAGGGTTAAGAAGTGAAGTTGAGCTTCCTCAAGCTGGTATTCGAAATATACTAGATATTAATTGTGGATTTGGTAGCTTTGGAGCTCATTTATTATCACTGAAAATAATGGCGGTTTGTATTGCGGCATATGAAGCTACTGGCAGCCAGGTTCAATTGTCTCTTGAGAGAGGTCTTCCAGCTATGATTGGCAACTTCATCTCCAGACAGCTTCCATATCCGTCATTATCATATGACATGGTTCACTGTGCTCAGTGCGGCATTATGTGGGATGAAAAAGATGGATTGTTCCTTATAGAAGTTGATCGTGTTCTTAAACCTGGAGGATATTTTGTTTTAACCTCACCTACAAGGAGACCACAGGGTTCATCACGGGAGAAAAAGAGAATAATGTCAAACGCAATAGAAGGGCTCACCCAACAACTTTGCTGGACTCTTTTAGCTCAGCGAGATGAAACTTTTGTGTGGCAGAAGACTACTGATGTTAATTGTTATGCATCTCGTAAGCAGCGTACTATACAGCTATGTGAAGGAGAGGATACTCAGTCATATTATAGGCCTCTTGTGCCATGTATTAGCGGGACATCTAGCAAGCGCTGGATTGCAATACAGAACAGATCTTCTGAATCTGAATTGAGAGTTCATCCTGAAGAATTTTATGAAGACTTACAACATTGGAGAACAGCTGTTAACAATTATTGGTCGTTACTTACACCGCTAATATTCTCTGATCATCCAAAGAGACTTGGGGATGAAGATCCATTCCCTCCATATAACATGGTCCGGAATGTTATGGACATGAGTGCTAATTATGGGGGGTTGAATGCTGCTCTGCTGGAGGAGAAAAAGTCAGTGTGGGTCATGAATGTGGTTCCTTCCAGGGCTTCTAATTCACTTCCTCTTATACTAGATAGAGGTTTTGCTGGTGTCATGCACGACTGGTGTGAACCTTTCCCCACCTACCCCCGGACGTATGATTTGCTTCATACAGATGGACTTCTTTCACTTCTCTCCTCAGAGAGGTGCAGCATGATGGACTTGTTCTTGGAGATGGATAGAATACTGCGTCCAGAGGGATGGGTCATTCTTTCTGATACTATGGGAGCTATTGAGACGGCTCGCAAGGTTGCAACACAAGTGCGTTGGGAAGCAAGGATAATTGATCTTCAGAATGGAAGTGACCAGCGACTACTTGTTTGCCAGAAACCATTTGTGAAGAAATAA 1860 0.4484 MRSSWLKKQSFIIGPKPPLSWLILCLVSILALIAVLSSSSSSSPPSPSSSNTDGSASRTAESLIYTNYRRIKEQAAVDYLELRSVSSGGARLKEVGLCGKERENFVPCHNVSANLISGFKEGEEFDRHCEVYKVTERCLVRPPKEYKTPLRWPSGRDVIWSANVKITKDQFLSSGSMTKRLMLLEENQIAFHSEDGLIFNGVKDYARQLAEMIGLRSEVELPQAGIRNILDINCGFGSFGAHLLSLKIMAVCIAAYEATGSQVQLSLERGLPAMIGNFISRQLPYPSLSYDMVHCAQCGIMWDEKDGLFLIEVDRVLKPGGYFVLTSPTRRPQGSSREKKRIMSNAIEGLTQQLCWTLLAQRDETFVWQKTTDVNCYASRKQRTIQLCEGEDTQSYYRPLVPCISGTSSKRWIAIQNRSSESELRVHPEEFYEDLQHWRTAVNNYWSLLTPLIFSDHPKRLGDEDPFPPYNMVRNVMDMSANYGGLNAALLEEKKSVWVMNVVPSRASNSLPLILDRGFAGVMHDWCEPFPTYPRTYDLLHTDGLLSLLSSERCSMMDLFLEMDRILRPEGWVILSDTMGAIETARKVATQVRWEARIIDLQNGSDQRLLVCQKPFVKK* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02290 619 Gene3D Vaccinia Virus protein VP39 192 379 IPR029063 -
Lapu3g02290 619 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 137 329 IPR029063 -
Lapu3g02290 619 FunFam probable pectin methyltransferase QUA2 187 371 - -
Lapu3g02290 619 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 425 580 IPR029063 -
Lapu3g02290 619 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 104 614 IPR004159 GO:0008168
Lapu3g02290 619 MobiDBLite consensus disorder prediction 38 57 - -
Lapu3g02290 619 CDD AdoMet_MTases 228 326 - -
Lapu3g02290 619 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 27 617 IPR004159 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02290 Lapu-Chr3 44095335 44101347 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02290 K23870 - gmx:100812239 1078.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g02290 3 44095335 44101347 Lapu2g01302 2 23798292 23803475 PCT