Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01302 ATGAGAAGCTCCTGGTTCAATAAATTATCCATCATTGTTGGCAATAGATCCCCTGTGAACTGGTTATTCTTGTGCCTAATCAGCCTGCTTGTGCTGATTTTTGTTCTCGGTTCATCATCTTCTGATATTGTTGACCTGGCACCTCATATTCCGGAATCTCTTATATACACAAACTTTAGGAGGGTTAAGGAGCAAGCAGTGGTTGATTATGTAGAGTTAAGGTCTGTGGCAAGGGGTATCTCTAGACAAAGAGAATTTGACCTTTGTGGCAAGGAAAGAGAGAATTTTGTGCCTTGTTACAATGTTTCAGCCAATTTGTTGGCAGGGCTTAAAGAAGGAGAAGAGTTTGATAGGCATTGTGAACTGTTAGTTGAGGAGGAAAGGTGTTTGGTTCGCCCTCCTAAGGAATATAAAATTCCCTTCCAATGGCCAACTGGCAGGGATGTTTTATGGAGTGGAAATGTGAAGATAACCAAAAACCAATTTCTTTCATCTGGAAGTATGACCAAAAGGTTAATGCTTGTAGAAGAGAACCAAATTGCTTTCCACTCGGAGGATGACAGTGTGAAAGATTACTCTCGCCAACTTGCAGAGATGATTGGGTTGGGAAGTGACAATGAGTTTCCTCAAGCTGGTGTTCGCACTATACTAGACATTAACTGTGGATTTGGCAGCTTTGCAGCTCATTTGGCATCACTGAATATAATGCCAGTTTGCGTTGCTGCATATGAGGCAACTGGTAGCCAGGTTCAGTTGGCCCTTGAGAGGGGCCTTCCTGCTATGATTGGCAACTTCGTTGCAAGACAACTTCCATATCCTTCATTATCATATGACATAGTTCACTGTGCTCAATGTGGCATCATTTGGGATGAAAAAGATGGAATGTTCCTTATAGAAGTTGACCGTGTTCTTAAACCTGGAGGATACTTTGTGTTAACCTCGCCGACAAGCAGGTCAGGGGGAAGCTCATCACAAATGAAAAGGAGGAATATGTTGAAGCCAATGGAAGAACTGACCCAGCAACTCTGTTGGACTCTTTTAGCTCAGCAAGATGAGACATTCGTCTGGCAAAAAACTGCTGATGTTAAATGCTATGCATCTCGAAAGAAGCATGCTATACCATTATGCAAAGAATATGATGATGTTCAGTCATACTATCGGCCTCTTCAACCATGTATAAGCGGGACCTCTAGCAAGCGCTGGATTGCAATACAGAACAGATCCTCTGGATCTGGTTTGAGTTCAGCTGAGCTTAAAATTAATGGAAAAGCAGGAGTTCGATCTGAAGATTATTTTGAAGACTTAGAATTCTGGAGATCAACTCTCAAGAACTATTGGTCTTTGCTTACACCACTAATTTTCTCCGACCATCCAAAGAGGCCGGGAGATGAAGATCCATTACCTCCATTTAACATGATTCGTAATGTTATGGACATGAGTACTAAATATGGAGGGTTGAACACTGCCCTTTTAGAAGAGAAAAAACCAGTTTGGGTCATGAATGTTGTTCCTGCTACAGTTTCTAATTCACTTCCTCTTATTCTAGATAAAGGTTTTGTTGGAGTTATGCATGACTGGTGTGAACCTTTCCCTACGTACCCGCGTACGTATGATATGCTACACGCAAGTGGACTTCTTTCTCATCTCACTTCAGAGAGATGCAGCATGATGAACCTATTCTTGGAGATGGACAGAATACTGCGTCCAGAGGGATGGGTCATTCTTTCTGATAACATGCGAACTATAGAGATGGCTCGCACACTCGCTGCACAAGTTCGGTGGGAAGCAAGGCTAATTGACCTTCAGAATGGAAGTGACCAGCGACTTCTTGTTTGCCAGAAACCATTTCTGAAAAAATGA 1860 0.4231 MRSSWFNKLSIIVGNRSPVNWLFLCLISLLVLIFVLGSSSSDIVDLAPHIPESLIYTNFRRVKEQAVVDYVELRSVARGISRQREFDLCGKERENFVPCYNVSANLLAGLKEGEEFDRHCELLVEEERCLVRPPKEYKIPFQWPTGRDVLWSGNVKITKNQFLSSGSMTKRLMLVEENQIAFHSEDDSVKDYSRQLAEMIGLGSDNEFPQAGVRTILDINCGFGSFAAHLASLNIMPVCVAAYEATGSQVQLALERGLPAMIGNFVARQLPYPSLSYDIVHCAQCGIIWDEKDGMFLIEVDRVLKPGGYFVLTSPTSRSGGSSSQMKRRNMLKPMEELTQQLCWTLLAQQDETFVWQKTADVKCYASRKKHAIPLCKEYDDVQSYYRPLQPCISGTSSKRWIAIQNRSSGSGLSSAELKINGKAGVRSEDYFEDLEFWRSTLKNYWSLLTPLIFSDHPKRPGDEDPLPPFNMIRNVMDMSTKYGGLNTALLEEKKPVWVMNVVPATVSNSLPLILDKGFVGVMHDWCEPFPTYPRTYDMLHASGLLSHLTSERCSMMNLFLEMDRILRPEGWVILSDNMRTIEMARTLAAQVRWEARLIDLQNGSDQRLLVCQKPFLKK* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01302 619 Gene3D Vaccinia Virus protein VP39 174 367 IPR029063 -
Lapu2g01302 619 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 75 617 IPR004159 GO:0008168
Lapu2g01302 619 CDD AdoMet_MTases 215 313 - -
Lapu2g01302 619 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 130 318 IPR029063 -
Lapu2g01302 619 FunFam probable pectin methyltransferase QUA2 178 359 - -
Lapu2g01302 619 Gene3D Vaccinia Virus protein VP39 519 608 IPR029063 -
Lapu2g01302 619 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 470 596 IPR029063 -
Lapu2g01302 619 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 95 614 IPR004159 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01302 Lapu-Chr2 23798292 23803475 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01302 K23870 - gmx:100781425 1093.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g01302 2 23798292 23803475 Lapu2g01302 2 23798292 23803475 ECH
Lapu3g02290 3 44095335 44101347 Lapu2g01302 2 23798292 23803475 PCT