Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01752 ATGGTATCTCCCACACTCACTTCCCCTCACCTTCAACTATTTCTAATTATCTCACTTTTCGTAACCTCATTGGTTACCGAATCAGCCACGCATTGGGGCGATGCGCAGGTTCTGAAGGAACTAAAGAACAACCTCGACCCTGCTTCCGTCACCCCAGGCTCTTGCGTCTATTCATGGGACTTCTCCGTTGATCCCTGCGACAACCTCTTCAGTGACAAGTTCACGTGCGGCTTCAGGTGCGACGCCGTCGTTTCCGGAACAAGTCGACTCACCGAACTCTCTCTCGACCCCGCAGGTTACACCGGTACGCTCTCCGCCACGTGGAACCTCCCCTACCTCGAAACTCTCGACGTCTCAAACAACTTCTTCTCCGGCCAAATCCCCGACTCGTTCTCCAACCTCACTCAGTTAACTCGACTCGGTTTATCCAAGAACTCCCTCGCCGGCAACATACCCTCTTCCTTATCCTCTCTCTCAAACCTCCAAGAGCTTTACCTCGATAACAACAACCTCCAAGGACCAATCCCCGTTACTTTTAACGGCCTCACAAACCTTAAACGCCTCGAAATGCAGTCCAACAGGCTAAACGGTGTTGTTCCGAGTTTGAGCTCTCTGAAGCATCTTTACTACATGGACCTCAGCTTCAATTCTTTCACCGGAGGCTTCCCCTCCACGTTGCCGGAATCTCTGGTTCAGATTTCAGTGCGGAACAACAGCTTAAGCGGCGCGTTGGAACCCGAATCTCTGAGGAACTTGAACTACTTGCAAGTGGTGGATTTGAGTGCCAACAGGTTCAGCGGTGCCGTTCCATTTGTTCTGTTCCAGCTACCCTCTTTGCAGCAATTGACGCTCTCTTTCAACAAGTTCTCGCACGTGGAAGCGCCTTCTTACGCTTTGAAAATGCGAAGTGGGGTGATAGCGGTTGATCTGAGCGACAACGAGCTTGGGGGATTTCTGCCGTTGTTCCCGGCGTTGATGCCGAGGCTTTCGTCGTTGTCACTGGAGAACAACAAGTTCGTGGGAATGATTCCGACCCAGTACGCGCTGAAGACGGTTTTCCCCGACGCTGGGATGGCTCCGTTCGAGAGGCTTCTTTTGGGGGGAAATTACTTGTTCGGAGGTATTCCGAGTCCTCTAATGGCGCTTGAACCAGGTTCTGCCACGGTGAGACTTGTGGATAATTGCTTGTGTAGGTGTCCTCTCACTTTCTTCTTCTGTCAGGGAGGGGAACAAAAGTCTTTTGAAGAATGCAAGAGATTTAGCCGCTTCATTCCCTAG 1278 0.5149 MVSPTLTSPHLQLFLIISLFVTSLVTESATHWGDAQVLKELKNNLDPASVTPGSCVYSWDFSVDPCDNLFSDKFTCGFRCDAVVSGTSRLTELSLDPAGYTGTLSATWNLPYLETLDVSNNFFSGQIPDSFSNLTQLTRLGLSKNSLAGNIPSSLSSLSNLQELYLDNNNLQGPIPVTFNGLTNLKRLEMQSNRLNGVVPSLSSLKHLYYMDLSFNSFTGGFPSTLPESLVQISVRNNSLSGALEPESLRNLNYLQVVDLSANRFSGAVPFVLFQLPSLQQLTLSFNKFSHVEAPSYALKMRSGVIAVDLSDNELGGFLPLFPALMPRLSSLSLENNKFVGMIPTQYALKTVFPDAGMAPFERLLLGGNYLFGGIPSPLMALEPGSATVRLVDNCLCRCPLTFFFCQGGEQKSFEECKRFSRFIP* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01752 425 SUPERFAMILY L domain-like 55 400 - -
Lapu3g01752 425 Gene3D Ribonuclease Inhibitor 201 419 IPR032675 -
Lapu3g01752 425 SMART LRR_typ_2 276 301 IPR003591 -
Lapu3g01752 425 SMART LRR_typ_2 158 181 IPR003591 -
Lapu3g01752 425 SMART LRR_typ_2 110 133 IPR003591 -
Lapu3g01752 425 SMART LRR_typ_2 182 205 IPR003591 -
Lapu3g01752 425 Gene3D Ribonuclease Inhibitor 33 200 IPR032675 -
Lapu3g01752 425 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 10 418 - -
Lapu3g01752 425 FunFam Nuclear pore complex protein NUP107 32 201 - -
Lapu3g01752 425 Pfam Leucine rich repeat 111 171 IPR001611 GO:0005515
Lapu3g01752 425 Pfam Leucine rich repeat 229 289 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01752 Lapu-Chr3 29014606 29016427 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01752 76 383 Receptor kinase-like Gene Family AT5G62230 33.333 8.13e-34 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01752 - - gmx:100787530 630.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01752 3 29014606 29016427 Lapu3g01752 3 29014606 29016427 ECH
Lapu3g01752 3 29014606 29016427 Lapu2g00730 2 6394140 6395393 ECH
Lapu2g00730 2 6394140 6395393 Lapu3g01752 3 29014606 29016427 PCT