Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00730 ATGGGGTTTCTCTGTGTCCCTCTATCTGGGATCATCACAATCTGGTGTCTCTTATTGTGTGCGGAATCAAAGACACACTGGGGAGATGCAGAGGTTCTGAAGGACATAAAGCGAGGTTTGCAACCAGCTTCGGTGATTCCAGGCTCTTGTGTCAGTTCCTGGGACTTCACCGTGGACCCCTGCGACAACCTATTCGGAGAGAAATTCACCTGCGGCTTCAGATGCGACGTCGTCGTTTCTGGCCTGAGCCGAGTCACGGAAGTTGCGCTCGACCAAGCTGGTTATGTTGGCTCTCTCGCCTTTACCTGGAACCTTCCTTTTCTACAAACACTCGATCTCTCCAAAAACCACTTCGCCGCACGAATTCCCGATTCCTTTTCAAACCTAACTCGCCTCCGCCAACTCAGTCTCTCGTCGAACTCCTTCTCCGGCGAGATACCCCCTTCCCTCGGCACACTCCCCAGCCTCGAAGAGCTTTACCTCGACAACAACAACCTACGAGGAACAATCCCTCAAGGCTTCCGCAACCTTAAAAGACTCGAACTCCAATCCAACAAACTCAACACCCACTTACCCAACTTTGACTCCTTCACAAACCTCAAATACCTCGATCTCAGCGATAATTCCATCGCCGGAGTGTTGCCGGCATCGCTCCCTGTTTCGCTTGTTCAGATATCAATTCGGAACAACAATTTAAACGGTGTCTTATCGAGTGAAAGCTTCAGGAACTTGACGAGGTTGCAGGTGGTGGATTTCAGCTCCAACCGAATGAGTGGGTTCGTTCCTTCGGTTTTCTTCGAGCTTCCGTCGTTGCAGCAGTTGACGCTGTCCTTCAACGAGTTCACGAAGATTGAAGCGCCTTACAAGGGAGTGGAGTCGCGGAGCGGGCTTATAGCGGTTGATTTGAGCAACAACAGGCTTGAGGGGTTCTTGCCGTCGTTCATGGCGATGATACCGACGCTATCGTCGTTGTCGTTGGAGAAGAACGAGTTCACAGGGCGAATACCGACCCAGTTAGCGTTGAAAACGGTGTTTCCCGAAACGGGAGTGTCTCCGTTGGGGAGGCTTCTGTTGGGTGGGAATTACTTGGTGGGAGGGATTCCCCGGCCCTTGTTAACGCTTAAACGCGATTCTGCAAACGTGAGTTTAGTTGATAACTGCTTGTACAGGTGCCCTCGTAGTTTCTTTTTCTGCCAAGGTGGACAACAGAAGTCATTGACACAATGTAACAGATTTGGTTCAACGGGTGAATAA 1254 0.508 MGFLCVPLSGIITIWCLLLCAESKTHWGDAEVLKDIKRGLQPASVIPGSCVSSWDFTVDPCDNLFGEKFTCGFRCDVVVSGLSRVTEVALDQAGYVGSLAFTWNLPFLQTLDLSKNHFAARIPDSFSNLTRLRQLSLSSNSFSGEIPPSLGTLPSLEELYLDNNNLRGTIPQGFRNLKRLELQSNKLNTHLPNFDSFTNLKYLDLSDNSIAGVLPASLPVSLVQISIRNNNLNGVLSSESFRNLTRLQVVDFSSNRMSGFVPSVFFELPSLQQLTLSFNEFTKIEAPYKGVESRSGLIAVDLSNNRLEGFLPSFMAMIPTLSSLSLEKNEFTGRIPTQLALKTVFPETGVSPLGRLLLGGNYLVGGIPRPLLTLKRDSANVSLVDNCLYRCPRSFFFCQGGQQKSLTQCNRFGSTGE* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00730 417 Gene3D Ribonuclease Inhibitor 192 290 IPR032675 -
Lapu2g00730 417 Gene3D Ribonuclease Inhibitor 291 393 IPR032675 -
Lapu2g00730 417 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 9 410 - -
Lapu2g00730 417 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 101 191 - -
Lapu2g00730 417 Pfam Leucine rich repeat 222 280 IPR001611 GO:0005515
Lapu2g00730 417 Pfam Leucine rich repeat 108 166 IPR001611 GO:0005515
Lapu2g00730 417 SUPERFAMILY L domain-like 45 391 - -
Lapu2g00730 417 Gene3D Ribonuclease Inhibitor 28 191 IPR032675 -
Lapu2g00730 417 Pfam Leucine Rich Repeat 199 218 IPR001611 GO:0005515
Lapu2g00730 417 SMART LRR_typ_2 197 220 IPR003591 -
Lapu2g00730 417 SMART LRR_typ_2 268 289 IPR003591 -
Lapu2g00730 417 SMART LRR_typ_2 153 176 IPR003591 -
Lapu2g00730 417 SMART LRR_typ_2 129 151 IPR003591 -
Lapu2g00730 417 SMART LRR_typ_2 244 267 IPR003591 -
Lapu2g00730 417 SMART LRR_typ_2 105 128 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00730 Lapu-Chr2 6394140 6395393 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00730 79 412 Receptor kinase-like Gene Family AT3G28890 28.460 1.27e-20 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00730 - - gmx:100811366 671.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g00730 2 6394140 6395393 Lapu2g00730 2 6394140 6395393 ECH
Lapu3g01752 3 29014606 29016427 Lapu2g00730 2 6394140 6395393 ECH
Lapu2g00730 2 6394140 6395393 Lapu3g01752 3 29014606 29016427 PCT