Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01519 ATGAAGAACACAAACACCAACACCAAATTCATCCTTCTCCACCCTTATATCCAAAAACAAGGAAGCTCCAATCGACTATGGCTCCTAGCCTTCATATCAATCCTCACCCTCGCTTTCCTCGTCACCCTCATTTACACCAGAGAATCCACCTTCATCACCACCGCAACCTCTTCTGTGATTGCTTCTTCCAATGCCCCGGTTTCTGGTCTCGGAAGTGCTCCTCTGCCAGCCACAGTGATCAACACTCTCCTCCACTACGCCTCAAAATCCAACGACACCAACCACATGCCACACTCAGACCTCAAACCCATCTCCGACGTGCTCCGAAAGTGCTCATCCCCATGCAACTTCCTCATCTTCGGTCTCACACCCGAAACCCTTCTCTGGAAAGCCCTCAACCACAACGGCAGAACCGTGTTCATCGACGAAAACCGTTATTACGCTGCATATTACGAAGAACTGCACCCAGAAATCGACGCCTACGACGTGCAATACACCACCAAGAGAAGCGAGATGAAGGAGCTCATAGCCTCTGCTAAAGAACGGGTAGCCAACGAGTGCAAGCCAGTGCAGAATCTTCTGTTTTCAGACTGCAAACTGGGACTCAACGACCTTCCCAACCACGTGTACGAGGTTGAATGGGATGTCATATTGGTGGACGGGCCACGTGGGGACTGGCCGGATGCTCCTGGGAGAATGTCGGCGATCTTCACCGCCGGTGTTCTTGCGAGGAGCAAAAAGGGTGGGAACCCTAAGACTCATGTGTTTGTGCATGACTTCTCTGGGGAGGTGGAAAAGGTTTGTGGGAGTGAGTTTCTGTGCAGTGAGAATTTGTTGGAGGCAAGTGAGAGTTTTGGGCATTATGTGGTGGAAAGGATGGATGAGAGTAGTGTTCAGTATTGTAAGAGTCACTCTTCTTCCGGTTCAGGGAATGCTTCATCAACGTAA 948 0.5042 MKNTNTNTKFILLHPYIQKQGSSNRLWLLAFISILTLAFLVTLIYTRESTFITTATSSVIASSNAPVSGLGSAPLPATVINTLLHYASKSNDTNHMPHSDLKPISDVLRKCSSPCNFLIFGLTPETLLWKALNHNGRTVFIDENRYYAAYYEELHPEIDAYDVQYTTKRSEMKELIASAKERVANECKPVQNLLFSDCKLGLNDLPNHVYEVEWDVILVDGPRGDWPDAPGRMSAIFTAGVLARSKKGGNPKTHVFVHDFSGEVEKVCGSEFLCSENLLEASESFGHYVVERMDESSVQYCKSHSSSGSGNASST* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01519 315 PANTHER OS11G0490100 PROTEIN 12 302 IPR006514 GO:0045492
Lapu3g01519 315 Pfam Polysaccharide biosynthesis 101 287 - -
Lapu3g01519 315 NCBIfam TIGR01627 domain 75 301 IPR006514 GO:0045492
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01519 Lapu-Chr3 17891002 17891949 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01519 - - gmx:100790865 570.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g00541 2 4652353 4653765 Lapu3g01519 3 17891002 17891949 ECH
Lapu3g01519 3 17891002 17891949 Lapu3g01519 3 17891002 17891949 ECH
Lapu2g00541 2 4652353 4653765 Lapu3g01519 3 17891002 17891949 PCT