Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00541 ATGAAGAACACTAACACCAACACAAAATTCATCCTCCTCCACCCATATATCCAGAAACAAGGAAACTCCAACCGCCTATGGCTTCTAGCCTTCATATCCTTCTTCACTCTGGCCTTCCTTGCCACCCTCATTTACACCAGAGACACATCCTCGTCCACCATCACCACTACCTCCTCCACCCCTTTATCTACTTTCACCAACACCCCTTTGCCTTCCTCCGTCATCAACACCCTCCTCCACTATGCCTCAAAGTCCAATGACACATACCACATGTCCCACTCAGACCTCAAAACCATCTCTGACGTGCTCCGAAAGTGCCCATCACCATGCAACTTCCTCATCTTTGGCCTCACCCCAGAGACCCTTCTCTGGAAAGCCCTCAACCACAACGGAAGAACTGTTTTCATCGATGAAAACCGGTACTATGCCGCATACTTCGAAGAAAAGCACCCCGAAATCGATGCCTATGACGTGCAATACACGACCAAAAGGAGCGAGATGAAGGAGCTGATAACTTCAGCTAAAGAACAGGCGGGAAACGAGTGTAGGCCAGTGCAGAATCTTCTGTTTTCTGAATGCAAGTTGGGACTCAACGATCTTCCCAACCATGTTTATGAAGTGGATTGGGATGTGATATTGGTGGATGGACCAAGAGGTGACTGGCCCGACGCTCCGGGCAGAATGTCGCCGATCTTCACCGCCGGCGTACTTGCCCGGAGCAAGAAGAGTGGGAACCCGAAGACGCATGTCTTTGTGCATGACTTCTCTGGGAAAGTGGAAAGGGTTTGTGGGAACGAGTTTCTGTGCAAAGAAAATTTGGTGGAGACAACGCACTCTTTGGGACACTACATGCTGGAAAAAATGGACGAGAGTAGCGTCAAGTATTGTAAGAATCATAGCCACTCATCAGGGTCTGCTTCTTCGTCTTAG 930 0.4925 MKNTNTNTKFILLHPYIQKQGNSNRLWLLAFISFFTLAFLATLIYTRDTSSSTITTTSSTPLSTFTNTPLPSSVINTLLHYASKSNDTYHMSHSDLKTISDVLRKCPSPCNFLIFGLTPETLLWKALNHNGRTVFIDENRYYAAYFEEKHPEIDAYDVQYTTKRSEMKELITSAKEQAGNECRPVQNLLFSECKLGLNDLPNHVYEVDWDVILVDGPRGDWPDAPGRMSPIFTAGVLARSKKSGNPKTHVFVHDFSGKVERVCGNEFLCKENLVETTHSLGHYMLEKMDESSVKYCKNHSHSSGSASSS* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00541 309 NCBIfam TIGR01627 domain 69 296 IPR006514 GO:0045492
Lapu2g00541 309 PANTHER OS11G0490100 PROTEIN 12 297 IPR006514 GO:0045492
Lapu2g00541 309 Pfam Polysaccharide biosynthesis 95 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00541 Lapu-Chr2 4652353 4653765 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00541 - - pvu:PHAVU_002G016200g 588.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g00541 2 4652353 4653765 Lapu3g01519 3 17891002 17891949 ECH
Lapu2g00541 2 4652353 4653765 Lapu2g00541 2 4652353 4653765 ECH
Lapu2g00541 2 4652353 4653765 Lapu3g01519 3 17891002 17891949 PCT