Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01513 ATGGACGTGGCCGGAGCATCACTTAGAGCAGCCATATCGCGGTGGGAGTTGGCGGTGTGGCGGCAGTACCAGCACGTGCTGGACAAGTGGACGCCGCACGTGGGGCGGCGGTGGGCGGGGTTGTTGGTGGTGGCGCTGATGTACGCGCTTCGCGTGTACTTGGTGGAAGGGTTCTACTTAGTGTCGTATGGTTTGGGAATATACATCCTCAACCTTCTGATCGGGTTCCTCTCCCCTCAGGTGGACCCTGAGATTCTCGATGCTGAGGGCCCCACCCTCCCCTCCTCCGCCAACGACGAATTTCGCCCCTTCGTTCGCCGCCTCCCTGAGTTCAAGTTCTGGTACTCAATCACAAAGGCGTTTTGCGTTGCATTTGTGATGACTTTCTCTAGTGCGTTTGATGTTCCAGTGTTCTGGCCAATACTCCTCTTCTACTGGGTGGTCCTATTCACCCTTACAATGAGGAGACAGATATCTCACATGATTAAGTACAAATATTTACCTTTCTCATCCGGAAAACAGCTAGATCAATCTGAGGATGTGATGGGAAGTTTAAGAAAGTTGCTCGAAGTCTTGTGTGGACCACGGGATGTCCGATTCCCATTTGAGCAAATTGTTTAG 621 0.5233 MDVAGASLRAAISRWELAVWRQYQHVLDKWTPHVGRRWAGLLVVALMYALRVYLVEGFYLVSYGLGIYILNLLIGFLSPQVDPEILDAEGPTLPSSANDEFRPFVRRLPEFKFWYSITKAFCVAFVMTFSSAFDVPVFWPILLFYWVVLFTLTMRRQISHMIKYKYLPFSSGKQLDQSEDVMGSLRKLLEVLCGPRDVRFPFEQIV* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01513 206 PIRSF AtER_Rer1p 2 184 IPR004932 GO:0016020
Lapu3g01513 206 Pfam Rer1 family 18 174 IPR004932 GO:0016020
Lapu3g01513 206 PANTHER PROTEIN RER1 9 176 IPR004932 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01513 Lapu-Chr3 17817321 17820059 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01513 1 184 Miscellaneous Gene Families AT4G39220 63.830 3.71e-85 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01513 - - gmx:100804538 295.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01513 3 17817321 17820059 Lapu3g01513 3 17817321 17820059 ECH
Lapu2g00537 2 4617369 4619998 Lapu3g01513 3 17817321 17820059 PCT