Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00537 ATGGATGTAGGAGTCGCCGACGATCATTCCCCGGAAGCCGCCATATCGCGGTGGAAATTCGCGGTGTCGCGGCAGTACCAGCACATGCTGGACAAAACGACGCCGCACGTCCTCCGTCGCTGGATCGGGTGTCTGGTGGTGGCTGCCGTCTACGTCCTCCGCGTGTACTTGGTCGAAGGCTTCTACATCGTCTCCTACGCCCTCGGCATTTACATCCTCAACCTCCTCATCGGCTTCCTCTCCCCTCAGGTCGATCCCGAGATTCACGACGGCCCTACCCTCCCCACCCGAGGATCCGATGAGTTCCGCCCCTTCGTTCGCCGCCTCCCGGAGTTCAAGTTCTGGTACTCGATCACAAAGGCGTTTTGCATTGCATTTGTGATGACTTTCTTTAGTGCCTTTGATGTTCCAGTATTCTGGCCGATACTCCTTTTCTACTGGGTGGTCCTATTCACACTTACAATGAGGAGACAAATATCACACATGATCAAATATAAATATGTTCCATTCTCATTTGGGAAACAGCGCTATAATGGAAAGAGAACACCAGCAGAAAGCACAAGCCCAACCGTGGACTGA 579 0.532 MDVGVADDHSPEAAISRWKFAVSRQYQHMLDKTTPHVLRRWIGCLVVAAVYVLRVYLVEGFYIVSYALGIYILNLLIGFLSPQVDPEIHDGPTLPTRGSDEFRPFVRRLPEFKFWYSITKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQISHMIKYKYVPFSFGKQRYNGKRTPAESTSPTVD* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00537 192 Pfam Rer1 family 20 178 IPR004932 GO:0016020
Lapu2g00537 192 PIRSF AtER_Rer1p 1 188 IPR004932 GO:0016020
Lapu2g00537 192 PANTHER PROTEIN RER1 6 181 IPR004932 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00537 Lapu-Chr2 4617369 4619998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00537 1 185 Miscellaneous Gene Families AT4G39220 68.085 2.83e-94 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00537 - - gmx:100805147 369.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g00537 2 4617369 4619998 Lapu2g00537 2 4617369 4619998 ECH
Lapu2g00537 2 4617369 4619998 Lapu3g01513 3 17817321 17820059 PCT