Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01284 ATGGAGTGGCCAGCATGTACGGATGAGTACGAGAAGCTCGTAATTCGCATGAGCACTCCCAGGGTTGTCATAGACAATGCCGTGTGCTCCACCGCTACAATAGTCAAGGTTGACAGCGGCAGAAAACATGGGATTCTTTTGGATGCCGTACAAGTGCTTTCTGATCTAAATCTATCAATTAAGAAGGCGTATATTTCCTCTGATGGGAGGTGGTTCATGGATGTTTTCCATGTCACTGATCAAGGCGGAAACAAGCTAACCGATCAGAGCGTTTTGAGTTATATTGAAAAGTCACTTGGCGGGATTCACAATGGGAATACCAATGTCTTAAACGGCCTCACTATCCTTGAATTAACTGGCACGGACCGTGTTGGTCTTCTTTCGGAGGTGTTTGCTGTATTAGCCGAGCAGCAATGTGATGTGGTTAATGCCAAGGTTTGGACTCACAATGGCCGAATTGCCTCCTTAATCTATGTCAAAGACAGCAATTCTGGAACTCTTATCGAGGACTCTCAGAGAATTAGTACTATTGAAGCACGTTTAAGAAATGTTTTAAAGGGTGACAATGATATTAGAAGTGCAAAAACTTCCATCACTAATGCCGTTGTGCACACAGAAAGAAGGCTGCACCAAATGATGTACGTTGACCGTGATTACCAGAGGAATCCCATCTTCAAGTTTGCTTCAGATATCCCAGTTGTCACCGTCCAAAATTGGGCAGAAAGGGGTTATTCGGTTGTCAATGTGCAGTGCAAGGATCGAATTAAACTTTTGTTTGATGTCGTGTGCAATTTGACTGACATGGAATATGTTGTGTTCCATGCAACAATTAAGACAACAGTTGACCAAGCGTATCTGGAGTTTTATATAAGACACAAGGATGGCACTCCAATTAGCTCGGAACCAGAACGTCATCGTGTGATTCAATGCTTGCAAGCTGCAGTGGAGAGAAGAGCATTTGAGGGGGTTATGCTAGAGTTATGTACGGAAGATAGACAGGGGCTTCTAGCAGAAGTGATGAGAACTTTTCGAGAGAATGGGCTTAATGTGACGAGGGCAGAGATATCTACCATTGGGGACAAGACATCAAATGTTTTTTATGTAACGGATGCGATCGGATACCCAGCTGATCCAAAAATCATCGAATCTGTAAGGCAGAAAGTTGGATTGAGCAATTTAAAAGTGAAGGAGTTGCCATTGGTATGCCATGAGAAGGCAGAAAGGGAAGATGAAGCAGTTGGGGTTGGTGGGGCAGTGTTGCTGTGTCTGGGGAGCCTCGTGAGAAGGAATCTATACAATTTGGGTTTGATAAAATCGTGTTCTTAA 1326 0.4374 MEWPACTDEYEKLVIRMSTPRVVIDNAVCSTATIVKVDSGRKHGILLDAVQVLSDLNLSIKKAYISSDGRWFMDVFHVTDQGGNKLTDQSVLSYIEKSLGGIHNGNTNVLNGLTILELTGTDRVGLLSEVFAVLAEQQCDVVNAKVWTHNGRIASLIYVKDSNSGTLIEDSQRISTIEARLRNVLKGDNDIRSAKTSITNAVVHTERRLHQMMYVDRDYQRNPIFKFASDIPVVTVQNWAERGYSVVNVQCKDRIKLLFDVVCNLTDMEYVVFHATIKTTVDQAYLEFYIRHKDGTPISSEPERHRVIQCLQAAVERRAFEGVMLELCTEDRQGLLAEVMRTFRENGLNVTRAEISTIGDKTSNVFYVTDAIGYPADPKIIESVRQKVGLSNLKVKELPLVCHEKAEREDEAVGVGGAVLLCLGSLVRRNLYNLGLIKSCS* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01284 441 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 1 397 IPR040217 -
Lapu3g01284 441 SUPERFAMILY ACT-like 29 101 IPR045865 -
Lapu3g01284 441 CDD ACT_ACR_3 244 318 - -
Lapu3g01284 441 SUPERFAMILY ACT-like 322 392 IPR045865 -
Lapu3g01284 441 SUPERFAMILY ACT-like 111 186 IPR045865 -
Lapu3g01284 441 Pfam ACT domain 114 163 IPR002912 -
Lapu3g01284 441 Pfam ACT domain 324 375 IPR002912 -
Lapu3g01284 441 Gene3D - 113 187 - -
Lapu3g01284 441 CDD ACT_ACR_1 32 100 - -
Lapu3g01284 441 ProSiteProfiles ACT domain profile. 115 196 IPR002912 -
Lapu3g01284 441 Gene3D - 321 394 - -
Lapu3g01284 441 ProSiteProfiles ACT domain profile. 324 403 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01284 Lapu-Chr3 13937864 13941172 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01284 - - gmx:100794729 815.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01142 1 24395618 24398586 Lapu3g01284 3 13937864 13941172 ECH
Lapu3g01284 3 13937864 13941172 Lapu3g01284 3 13937864 13941172 ECH