Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01142 ATGGATTGTTGGTCCTCTCCTCTGCCTCTACATGATGAATTCGAGAAGCTTGTCATTCGAATGAACCCTCCCAGAGTTGCTGTGGATAACATTTCGAGCAGGACAGACACTGTGATAAAGGTTGATAGCGCCAACAGGCGCGGGAGTTTGCTGGAAGTGGTTCAGGTTCTCACTGACATGAATCTCAGTGTTAGAAGAGCTTACATTTCCTCTGATGGAGAATGGTTCATGGATGTTTTTCATGTCACGGATCAAAATGGGAAAAAGTTTGTGCAAGATGATGTTGCTGACCGTATTCAACAGTCACTGGGTCCAAGAGCCTCGAGTTTCCGATCCTTGAGAAGATCTGTTGGGGTTCAAACTGAAGCAGAACATACAACCATTGAATTAACCGGAAGAGACAGGCCAGGGTTGCTTTCAGAAGTTTTTGCTGTTCTTGCAGACCTCAAATGCAATGTGGTAGCAGCAGAAGTCTGGACACACAATTCAAGAATGGCATCTGTTGTTTACATCACAGATGAGGCGACAGGATTATCCATCGACAATCCTGATCGCCTTGCCAAGATCAAGCAGCTTCTACTGTATGTGCTGAAAGGAGACATAGATAAGAAGAGTGCCAACACTGCTGTTTCTGTTGGTTCTACTCACAAGGATAGGAGGCTGCATCAGTTGATGTATGCCGACCGTGATTATGACATAGACGATGGAGATTCTGGGTCAACAAGTGACAGGAACAAGCTCCTTGTAACTGTTGATGATTGCATAGATAAGGGATATACTGTTGTGAACTTGAGGTGTCCAGACAGACCTAAGTTACTGTTTGATACCGTGTGCACACTCACAGACATGCAGTATGTTGTGTACCATGGAACTGTCATTGCAGAAGGACCAGAGGCTTATCAGGAATATTATATAAGGCATGTGGATGGATGTCCTATCAGTTCTGAAGCGGAAAGGCAGAGAGTGATTCATTGTTTGGAGGCAGCTATTAGGAGACGAACTTCTGAGGGCATAAAGCTAGAACTGTGTGGGGAGGATAGGGTTGGCCTTCTGTCTGATGTAACTCGCATCTTCAGAGAAAATGGTCTTTCAGTCAACCGTGCTGAAGTTACAACCAGGGGCACTCAAGCTATGAATGTTTTCTATGTGACTGACGTGACTGGAAATCCAGTTAAGAGTGAAACCATTGAAGCAGTTCGAAAAGAGATCGGCTTGGCCATACTGCATGTCAAAGATGATGTCTGCTCAAAACCTCCACCCCATGAGAGAGGAAAATTCTCTTTGTCTAGTCTCTTTCGATCAAGCTCTGAGAAGTTTCTTTACAACTTGGGTCTAATGAAGTCTTATTCTTGA 1353 0.4449 MDCWSSPLPLHDEFEKLVIRMNPPRVAVDNISSRTDTVIKVDSANRRGSLLEVVQVLTDMNLSVRRAYISSDGEWFMDVFHVTDQNGKKFVQDDVADRIQQSLGPRASSFRSLRRSVGVQTEAEHTTIELTGRDRPGLLSEVFAVLADLKCNVVAAEVWTHNSRMASVVYITDEATGLSIDNPDRLAKIKQLLLYVLKGDIDKKSANTAVSVGSTHKDRRLHQLMYADRDYDIDDGDSGSTSDRNKLLVTVDDCIDKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVYHGTVIAEGPEAYQEYYIRHVDGCPISSEAERQRVIHCLEAAIRRRTSEGIKLELCGEDRVGLLSDVTRIFRENGLSVNRAEVTTRGTQAMNVFYVTDVTGNPVKSETIEAVRKEIGLAILHVKDDVCSKPPPHERGKFSLSSLFRSSSEKFLYNLGLMKSYS* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01142 450 SUPERFAMILY ACT-like 335 404 IPR045865 -
Lapu1g01142 450 CDD ACT_ACR_4 337 408 - -
Lapu1g01142 450 ProSiteProfiles ACT domain profile. 38 118 IPR002912 -
Lapu1g01142 450 Pfam ACT domain 37 86 IPR002912 -
Lapu1g01142 450 Pfam ACT domain 341 402 IPR002912 -
Lapu1g01142 450 Pfam ACT domain 126 174 IPR002912 -
Lapu1g01142 450 CDD ACT_ACR_3 259 333 - -
Lapu1g01142 450 ProSiteProfiles ACT domain profile. 339 417 IPR002912 -
Lapu1g01142 450 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 11 411 IPR040217 -
Lapu1g01142 450 Gene3D - 337 411 - -
Lapu1g01142 450 ProSiteProfiles ACT domain profile. 127 204 IPR002912 -
Lapu1g01142 450 SUPERFAMILY ACT-like 35 104 IPR045865 -
Lapu1g01142 450 SUPERFAMILY ACT-like 124 193 IPR045865 -
Lapu1g01142 450 Gene3D - 125 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01142 Lapu-Chr1 24395618 24398586 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01142 - - gmx:100798999 846.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01142 1 24395618 24398586 Lapu1g01142 1 24395618 24398586 ECH
Lapu1g01142 1 24395618 24398586 Lapu3g01284 3 13937864 13941172 ECH