Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00507 ATGTCTAGAGTTGAAGGTGGTAAAAGGAGTGGTGAAGAGGAGAACAACTTGCAGTCAAAAGATGTTGAAACCATAGACAAAGCTCCGTGCATAGAGAAAAGCTCTTCCACGAATTCAAAATCTTCCAAAGCCCAGTTACTTGATCCCAAATCAAAGGCTAAAGATAGCAAAGAAGATAACTTACGTAAGGATAAGAAGTCCGTATGGAATTGGAAGCCATTGAAGGCCCTTTCCCTCTCTCGCAATAAGAAGTTCAATTGTAGTTTTTCTGTCCAAGTCCATGTGATTGAAGGGTTGCCTTTGAGTTTCAATGATTCTTGCATTTGTGTGTATTGGAAGAGGAGGGATGCGCTTTTGGTGACCCCTCCAGCCAAGGTGATTCAAGGTGTGGCTGAGTTTCAAGACATTTTGACACACAGTTGCTCAATCAATGGAAGTAGGACTGGACCCAAAAATTCTGCTAAATATGAAGCCAAGAATTTTCTGCTCTATGCTTCTACGCCCGGTGCGCCAGAAGTTGATTTGGGGAAGCACCGAGTGGACCTCACAAGGTTGCTTCCTCTCACCCTGGAAGAGCTTGAAGAGGAGAAAAGGTCAGGGATATGGACTACAAGTTTTCGATTATCAGGAACCGCAAGGGGTGCAGTAATGAATGTCAGTTTTGGGTATGTCATTGTTGGTGACGATACTAGTGCTACCAGAGACAACCATTGTGATCCTCCTAATGTATTCACTCCCAAGGAAAATGGTATGCCTTTGATGGAACCAGATATAAAACCTAGTCAGGTTGACAGGAGGCATAGATGTACCGGAAGTTTGCCAAACTTTGTCGGTAATTTTTATTCATCTCAAAATGTAGATGAGACGAAAGATCTTCATGAGGTGTTGCCATCATCAAAATCAGCTCGAGCCAGCCCAGTATACATCTCATTTAAGGAATTTGTTGAAGAAAGGAGTTGTAGTCCTCTGCACGCCAAACCTGAACTTGAGGGAATTAAAGAAAATATTGACCCCATCAAACCTGTGGTTTGTTCTTCATCTGTTAATGAAAAGGAAAAGACAGAAGCGAATCCGGGTAATGAAAACGTGGACACGGTTACGCCAAATGGTTATCCTTTACCTGATTCTGGAATAGAAATATTCAAAGAATGTGAAGGTAATGATGAATTTTCTGTTGTTGATAAGGGCATCGAATTTTTATTAGATGAACATGTTAAACTAAAGGAATCTATTGGAAAAGCCTTTATTGATGTCTACACAGTTGACACTATTCGGACCCTTGATAATGCTGGTGTTCAAGTATCTTTTCAAGACCATGGTAATCAGGATTCCCTGGATGCACTAAGCGATAATTGTAAGGAAAGTGTTGCCGTGCATGAATTTTCCAACCGAAAGGATGACTTTTGGACGAAAGAACTTCTACTGCAAGAACTAGAATCAGCTTTAAATAGTGTCTCAGAGTTGGAGACAGCGGCAACGGATTCTCCTAAAATCATGGAAGTCAAATCTGAGTACAAGTTGACAAAGTCACAAAGCTTGGATGATGTTACAGAATCAGTTGCCAGTGACTTTTTAAGTATGCTTGGCATAGACCGTAGTCCAAGGGGTTTGAGTTTTGAAGGTGAGACTGATTCTCCAAGAGAGCTCCTTTTAAGACAATTTGAGAATGAGGTTCGTTCGGAGGGCTTCTCTTTGTTTGATTTTGACATGGGCAGTGATAATGAAGCAGATAGTGGTTATGATTCTTCTTTTGGATCTGAGCATTGGAAGTCCTCTACGGGTATTAAGCCAGCATCCTCAATACCAAATCCACATAAAGGGCATCTAATTGAGTTTGAGGATGTGAAGAGCAAACTAAAGGTCCAGATGCTAGAAGACTTGGAAACAGAAGCCTTAATGCGTGAATGGGGTTTGAATGAGAAGGCTTTTCAGCATTCTCCTACAAAAGATTATAATGGCTTAGGAAGTCCAATATACTTTCTACCTGAAAAGACTCTACCATTACCTCCTCTAGCAGAGGGGTTAGGTCCTTTTCTTCAGACCGGGGATGGGGGCTTTCTACGGTCAATGAATCCCGCACTCTTCCGGAATAGTAGAACTGGAGGAACATTAATAATGCAGGTTTCCAACCCTGTCGTGGTGCCTGCTGAAATGGGTTCTGGGATAATGGAGATTTTGCAGTATTTCGCTTCAGTGGGAATTGAAAAACTTTCCAAGCACGCAAACAAGTTAATGCCTCTAGAAGATATCACAGGGAAGACAATGCAACAAATATCAAGGGAAGCAAAGCCAGTCTTGCAGGGAAGATACAGGCAATTGCATTTGCAGCATAATTTGGTAACAGGACAGGATTCTACTTGTTCGCAAAAAGGCTTGACAGGAACACTATCTGGTGGACTAGTGTCTAACAAGTTAAGTTCAGATTCAGCTGGCAACCAAAGAGGCTCAGAGTTTGTTTCATTGGATGATCTTGCTCCATTAGCTATGGATAAAATTGAAGCACTTTCGCTGGAGGGTTTGAGAATACAATCTGGGATGTCAAATGAGGATGCACCATCAAACATCATTGCACAATCCTATGGGGATATTTCAGCTCTGCAAGGCAAGGGTGTTAGCATTAGGGGCTCCCTTGGCCTAGATGGAGCTTCTGCCATGCAATTGTTGAATATGAAAAACAGCAACAGTGATGAATATGATGGGGTTGATGGCATAATGTCCCTAGCATTAACTCTTGATGAATGGATGAGGCTGGATTCTGGTGAGATTGATGACGATATAGATAATATCAGTGAGCATACTTCGAAACTTCTTGCTGCCCATCATGCTAACTCTTTTGACTTGATTCGTGGGAAGAGTTCAAAGGGAGAGGGGAAAATAGGAAGGAAGTGTGGTTTGTTGGGAAACCAATTCACAGTAGCTCTAATGGAGCAGCTTCGTGATCCTCTGAGAAATTATGAGCCTGTTGGAACACCAATGCTTGCTCTTATACAAGTGGAGAGAGTGTTCAGCCCACCAAAGCAAGAGATTTATAGGCACTTGTGTGCGGCAGGGAAGAACGATGATGAGTGTGAAATAGTAGCCAAGGTGGAAATGAAGGGCAACAAAGAAGAGAAAAGTTCTGAAGATGAGGCCATTCCTCAGTTCAAAATTACAGAAGTACATGTTGCAGGTCTGAACAAAAGGAAGTGTTGGGGAACTTCGAGACGACGACAACAACAAGAACAATCTGGTTCCCGCTGGTTGATTGCCAATGGAATGGGGAAGAGCTTTAAGGATCCAGTACTGAAGTCAAATGTAGTAACTAAATCTAGTGCTCCAATCACTGCCACAAACGTGCAACCGGGTGACACACTGTGGAGCATATCATCTCGTATTTATGGTAGACTAACAAGATGGAATTGGTAG 3405 0.4226 MSRVEGGKRSGEEENNLQSKDVETIDKAPCIEKSSSTNSKSSKAQLLDPKSKAKDSKEDNLRKDKKSVWNWKPLKALSLSRNKKFNCSFSVQVHVIEGLPLSFNDSCICVYWKRRDALLVTPPAKVIQGVAEFQDILTHSCSINGSRTGPKNSAKYEAKNFLLYASTPGAPEVDLGKHRVDLTRLLPLTLEELEEEKRSGIWTTSFRLSGTARGAVMNVSFGYVIVGDDTSATRDNHCDPPNVFTPKENGMPLMEPDIKPSQVDRRHRCTGSLPNFVGNFYSSQNVDETKDLHEVLPSSKSARASPVYISFKEFVEERSCSPLHAKPELEGIKENIDPIKPVVCSSSVNEKEKTEANPGNENVDTVTPNGYPLPDSGIEIFKECEGNDEFSVVDKGIEFLLDEHVKLKESIGKAFIDVYTVDTIRTLDNAGVQVSFQDHGNQDSLDALSDNCKESVAVHEFSNRKDDFWTKELLLQELESALNSVSELETAATDSPKIMEVKSEYKLTKSQSLDDVTESVASDFLSMLGIDRSPRGLSFEGETDSPRELLLRQFENEVRSEGFSLFDFDMGSDNEADSGYDSSFGSEHWKSSTGIKPASSIPNPHKGHLIEFEDVKSKLKVQMLEDLETEALMREWGLNEKAFQHSPTKDYNGLGSPIYFLPEKTLPLPPLAEGLGPFLQTGDGGFLRSMNPALFRNSRTGGTLIMQVSNPVVVPAEMGSGIMEILQYFASVGIEKLSKHANKLMPLEDITGKTMQQISREAKPVLQGRYRQLHLQHNLVTGQDSTCSQKGLTGTLSGGLVSNKLSSDSAGNQRGSEFVSLDDLAPLAMDKIEALSLEGLRIQSGMSNEDAPSNIIAQSYGDISALQGKGVSIRGSLGLDGASAMQLLNMKNSNSDEYDGVDGIMSLALTLDEWMRLDSGEIDDDIDNISEHTSKLLAAHHANSFDLIRGKSSKGEGKIGRKCGLLGNQFTVALMEQLRDPLRNYEPVGTPMLALIQVERVFSPPKQEIYRHLCAAGKNDDECEIVAKVEMKGNKEEKSSEDEAIPQFKITEVHVAGLNKRKCWGTSRRRQQQEQSGSRWLIANGMGKSFKDPVLKSNVVTKSSAPITATNVQPGDTLWSISSRIYGRLTRWNW* 1135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00507 1134 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 1 1132 IPR039614 -
Lapu3g00507 1134 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 82 228 IPR019448 -
Lapu3g00507 1134 Coils Coil 471 491 - -
Lapu3g00507 1134 ProSiteProfiles C2 NT-type domain profile. 77 225 IPR019448 -
Lapu3g00507 1134 MobiDBLite consensus disorder prediction 47 62 - -
Lapu3g00507 1134 CDD LysM 1112 1133 IPR018392 -
Lapu3g00507 1134 MobiDBLite consensus disorder prediction 350 369 - -
Lapu3g00507 1134 MobiDBLite consensus disorder prediction 30 46 - -
Lapu3g00507 1134 MobiDBLite consensus disorder prediction 1 28 - -
Lapu3g00507 1134 MobiDBLite consensus disorder prediction 1 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00507 Lapu-Chr3 5172511 5176017 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00507 - - vra:106766502 1722.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g00507 3 5172511 5176017 Lapu3g00507 3 5172511 5176017 ECH
Lapu3g00507 3 5172511 5176017 Lapu9g00408 9 4318039 4322636 PCT