Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00657 ATGGTTTGTAGCCTTGCCGTATTAGGATTCAGCTTGACCATGGTGGATACATCCCATGAGAAGCTCTTGTGGGCCTTGATTCTTAGCATAGTGGCCACTTATATATATGTTGCATTTTTCAATCTCGGACTTGGACCTGTCACATGGGTGTATAGCTCAGAGATTTTCCCTTTGAAGTTGAGAGCACAAGGAGCAAGTATAGGAGTTGCAGTCAACAGACTCACCAATGCTGCTATTTCCATGAGTTTTATTTCAATCTATAATGCAATCACTATTGGGGGGACCTTTTTCTTGTTTGCTGGTATATCTATACTGGCTTGGTTGTTCTTCTACTTTTTGTTGCCCGAAACCAAGGGCAAGGCCTTGGAAGAGATGGAGATGGTTTTCAGCAAAAAGTGTGCAAGGAATAGTGTAACTACAGAAACCGACTGA 432 0.4236 MVCSLAVLGFSLTMVDTSHEKLLWALILSIVATYIYVAFFNLGLGPVTWVYSSEIFPLKLRAQGASIGVAVNRLTNAAISMSFISIYNAITIGGTFFLFAGISILAWLFFYFLLPETKGKALEEMEMVFSKKCARNSVTTETD* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00657 143 SUPERFAMILY MFS general substrate transporter 25 126 IPR036259 -
Lapu2g00657 143 Pfam Sugar (and other) transporter 1 129 IPR005828 GO:0016020|GO:0022857|GO:0055085
Lapu2g00657 143 PANTHER PROTON MYO-INOSITOL COTRANSPORTER 1 133 - -
Lapu2g00657 143 PRINTS Sugar transporter signature 30 51 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lapu2g00657 143 PRINTS Sugar transporter signature 53 65 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lapu2g00657 143 Gene3D MFS general substrate transporter like domains 1 140 IPR036259 -
Lapu2g00657 143 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 118 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00657 Lapu-Chr2 5763926 5771799 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00657 1 135 Organic Solute Cotransporters AT4G36670 64.444 1.04e-58 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00657 - - gmx:102661358 250.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01637 3 21231652 21233911 Lapu2g00657 2 5763926 5771799 ECH
Lapu2g00657 2 5763926 5771799 Lapu2g00657 2 5763926 5771799 ECH