Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00656 ATGGAGATACGTGGTCAAAAAGAGCAGTTCAACAAATATGCTTTTGCATGTGTTTTAGTCGCTTCCATGATATCCATTATATTTGGATATGATACGGGTGTAATGAGTGGAGCCATGATATTCATAAAGGAGGAGTTTGGAATCAGCGACACCCGACAAGAAGTTCTTGCAGGCATCTTAAACCTTTGTGCATTGGTAGGGTCTTTAGCTGCAGGAAGAACCTGTGATTACTTTGGTCGACGCTACACAATCGCTCTAGCCTCTGTCCTTTTCATGACTGGTTCAATTCTCATGGGATATGGTCCAAACTACGCAATTCTTATGCTGGGAAGATGTGTTGCGGGTATTGGCGTGGGTTTTGCTCTTCTGATAGCACCAGTTTATTCTGCAGAAATCTCCTCTGCTAAATCCCGAGGCTTTCTAGCTTCCCTACCTGAACTTGGTATTGGTATTGGAATTTTACTTGGCTACGTTGCAAACTATTTCTTGGGGAAGTTGACTTTGAGGGTTGGGTGGAGATTGATGCTTGGTATTGCATCAGTTCCTTCACTTGTTTTGGCTTTAGGCATTCTCGTAATGCCTGAGTCTCCAAGGTGGTTGCTGATGCAAGGCCATCTGGGAAAAGCAAAGAAAGTTCTGTTGCAAGTTTCGAATACTGAACAAGAAGCTGAGCTTCGGTTCAAGGATATAAAGATTGCTGCTGGAATAATTGATGAGAATTGCCCTGAAGAAACTGTTAAGCTTCCACAAAAGAACCTTGGTGAAGGGGTTTGGAAAGAGTTGCTTGTGAGACCCTCTTCATCTGTTCGGTGGATGCTGGTTGCAGCTGTGGGGGTTCACTTTTTTCAGCACGCTACTGGAATTGAAGCTGTGATGCTGTACAGTCCAAGAATATTTAAGAAAGCAGGTGTTACCTCTAAGGACAAGCTCTTGCTCACAACCATCGGAGTAGGAGTTACAAAAATCTTTTTCTCGACAATAGCCACATTTTTTCTTGACAGAGTTGGGAGAAGACGCCTCTTGCTTTCAAGCACTGGAGGAATGGTTTTTAGCCTTGCAGTATTAGGATTCAGCTTGACCATGGTTCATAGTTCCCAGGAAAAGCTCTTATGGGCCTTGACCCTTAGCATAGTAGCTACTTACTCATTTGTTGCTTCTTTTAACATGGGACTTGGACCTGTGGCATGGGTGTATAGCTCAGAGATTTTTCCTCTGAAATTGAGAGCACAAGGAGTAAGCATAGGAGTTGCAGTTAACAGAGTCATGAATGCTGCTATTACCATGAGCTTTATTTCAATCTATAAAACACTCACCATAGGCGGGACCTTTTTCATGTTTGCTGGCATATCTATATTGGCTTTGTTATTCTTCTACTTTTTCCTGCCAGAAACCAAGGGCAAGGCCTTGGAAGAGATGGAGATGGTTTTTAGCAAAAACTATAGTAGGAATGTAGCTGCAGAAACTGATCTGAGGCAGAATGTGTAA 1485 0.4283 MEIRGQKEQFNKYAFACVLVASMISIIFGYDTGVMSGAMIFIKEEFGISDTRQEVLAGILNLCALVGSLAAGRTCDYFGRRYTIALASVLFMTGSILMGYGPNYAILMLGRCVAGIGVGFALLIAPVYSAEISSAKSRGFLASLPELGIGIGILLGYVANYFLGKLTLRVGWRLMLGIASVPSLVLALGILVMPESPRWLLMQGHLGKAKKVLLQVSNTEQEAELRFKDIKIAAGIIDENCPEETVKLPQKNLGEGVWKELLVRPSSSVRWMLVAAVGVHFFQHATGIEAVMLYSPRIFKKAGVTSKDKLLLTTIGVGVTKIFFSTIATFFLDRVGRRRLLLSSTGGMVFSLAVLGFSLTMVHSSQEKLLWALTLSIVATYSFVASFNMGLGPVAWVYSSEIFPLKLRAQGVSIGVAVNRVMNAAITMSFISIYKTLTIGGTFFMFAGISILALLFFYFFLPETKGKALEEMEMVFSKNYSRNVAAETDLRQNV* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00656 494 FunFam probable polyol transporter 4 7 479 - -
Lapu2g00656 494 NCBIfam sugar porter family MFS transporter 10 472 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lapu2g00656 494 ProSitePatterns Sugar transport proteins signature 2. 113 138 IPR005829 GO:0016020|GO:0022857|GO:0055085
Lapu2g00656 494 PRINTS Sugar transporter signature 25 35 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lapu2g00656 494 PRINTS Sugar transporter signature 377 398 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lapu2g00656 494 PRINTS Sugar transporter signature 108 127 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lapu2g00656 494 PRINTS Sugar transporter signature 283 293 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lapu2g00656 494 PRINTS Sugar transporter signature 400 412 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lapu2g00656 494 Pfam Sugar (and other) transporter 18 476 IPR005828 GO:0016020|GO:0022857|GO:0055085
Lapu2g00656 494 SUPERFAMILY MFS general substrate transporter 8 473 IPR036259 -
Lapu2g00656 494 ProSiteProfiles Major facilitator superfamily (MFS) profile. 17 465 IPR020846 GO:0022857
Lapu2g00656 494 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 10 479 IPR045262 GO:0015144
Lapu2g00656 494 Gene3D MFS general substrate transporter like domains 6 480 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00656 Lapu-Chr2 5763863 5771799 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00656 2 482 Organic Solute Cotransporters AT4G36670 64.803 0.0 647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00656 - - gmx:102661233 848.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01637 3 21231652 21233911 Lapu2g00656 2 5763863 5771799 PCT