Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00655 ATGTCTTCGGAAGATAAAAACACGGACGGACAACAGTTCATGGAAAACGGTATTCGTGAAAACGGAGGCAACCATAGAAGACTCAACAAGTATGCCTTTGCCTCTGCGCTAGCTGCCTGTGTTGTCTCTGCTATGTTTGGTTATGTCACAGGAGTGATGAGTGGAGCACTGGTATTCATTCAAGAAGATCTTCAAATCAGTGACCTACAAATACAACTTCTAGTAGGTATGTCACACTTGTGTGCGGTACCAGGTAGCTTGATTGCAGGAAGAACATCTGATTATATAGGTCGCCGCTACACCATCATTCTGGCTTCTATAGCCTTCTTATTAGGTTCAATTATAATGGGCTATGGCCAACCTTATGCAATCCTAATGATTGGAAATTGTATAGTTGGAGTTGGAGTGAGTTTTGCAATGGTAGTAGCACCACTATATAGTACAGAGATTTCACCTCCTTCTTCAAGAGGCTTTTTTACCTCTCTCCCAACACTTTCAGTCAACACAGGATTCTTGCTCGGATACATATCAAACTATTTCTTTGAAAAATTGTCACTGAGACTTGGATGGAGGATGATGGTGGCTGTTCCTGCAATTCCTTCAGTTTTCCTAATCCTTATCATGCTAAAGTTGGTGGAGTCTCCAAGGTGGTTAGTCATGCAAGGACGTGTCGGTGAGGCCAGGAAAGTGCTTTTACTAGTCTCTAATGCGAAGGAAGAAGCTGAACAAAGGTTGAGGGAAATAAAAAATGTTGTTGGAATTGATGAAAACTGCACCCTAGACACTGTGGAGGTTCCAAAGAAAACTAGTAGCGGTAAAGGAGCTCTGAAGGAGTTGTTTTGTAAAGCTTCACCTTCTGTACGTAGGATACTGATTTCGGCAGTTGGACTTCATTTGTTCCTGCGGATGGGTGGAAGTGCTGTTATTTTATTGTATAGTCCAAGGGTGTTTGAGAGAACAGGAATCACTGACAAAAGCACACTCATGCTTGCCACTGTTGGTATAGGAGTGAGCAAAGTTGTATTTTCAGTCATATCAATATTCTTGTCAGATAAATTTGGGAGGAGGATTCTCTTGCTGATTAGTGCAGTAGGTTTGAGTGTGACCATGTTTGGGCTGGGTATTTGCTTGACCATAGCGGAAGAGTCCAAAGAAAAACAATTTTGGGCACCATATTTTACCGTTATTCTTACATATATCTTTGTGGCTTCAATGTCTGTTGGAATAGCACCAGTGACATGGGTTTATAGCTCTGAGATATTTCCCCTTAGGTACAGAGCACAAGGCCTCAGTGTTTGCGTGATTGTCAACAGAATTTCGACTGTGGTAGTTGTTACAAGTTTCATTTCGATTTATAAAGCCATAACAATGGGTGGGGTGTTCTTTGTGTTCTTGGCTATCAATATTGCGGCTTTGGTGTTCTATTTCACTTTGCCTGAAACTAAAGGAAGATCACTGGAAGATATGGAGACTGTCTTTGAAAGACATTATAAGTAA 1497 0.4135 MSSEDKNTDGQQFMENGIRENGGNHRRLNKYAFASALAACVVSAMFGYVTGVMSGALVFIQEDLQISDLQIQLLVGMSHLCAVPGSLIAGRTSDYIGRRYTIILASIAFLLGSIIMGYGQPYAILMIGNCIVGVGVSFAMVVAPLYSTEISPPSSRGFFTSLPTLSVNTGFLLGYISNYFFEKLSLRLGWRMMVAVPAIPSVFLILIMLKLVESPRWLVMQGRVGEARKVLLLVSNAKEEAEQRLREIKNVVGIDENCTLDTVEVPKKTSSGKGALKELFCKASPSVRRILISAVGLHLFLRMGGSAVILLYSPRVFERTGITDKSTLMLATVGIGVSKVVFSVISIFLSDKFGRRILLLISAVGLSVTMFGLGICLTIAEESKEKQFWAPYFTVILTYIFVASMSVGIAPVTWVYSSEIFPLRYRAQGLSVCVIVNRISTVVVVTSFISIYKAITMGGVFFVFLAINIAALVFYFTLPETKGRSLEDMETVFERHYK* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00655 498 ProSitePatterns Sugar transport proteins signature 1. 89 106 IPR005829 GO:0016020|GO:0022857|GO:0055085
Lapu2g00655 498 ProSiteProfiles Major facilitator superfamily (MFS) profile. 35 483 IPR020846 GO:0022857
Lapu2g00655 498 PRINTS Sugar transporter signature 418 430 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lapu2g00655 498 PRINTS Sugar transporter signature 395 416 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lapu2g00655 498 PRINTS Sugar transporter signature 43 53 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lapu2g00655 498 PRINTS Sugar transporter signature 126 145 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lapu2g00655 498 NCBIfam sugar porter family MFS transporter 29 488 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lapu2g00655 498 Coils Coil 231 251 - -
Lapu2g00655 498 MobiDBLite consensus disorder prediction 1 21 - -
Lapu2g00655 498 PANTHER PROTON MYO-INOSITOL COTRANSPORTER 20 494 - -
Lapu2g00655 498 FunFam probable polyol transporter 4 25 496 - -
Lapu2g00655 498 SUPERFAMILY MFS general substrate transporter 25 490 IPR036259 -
Lapu2g00655 498 MobiDBLite consensus disorder prediction 1 18 - -
Lapu2g00655 498 Pfam Sugar (and other) transporter 36 493 IPR005828 GO:0016020|GO:0022857|GO:0055085
Lapu2g00655 498 Gene3D MFS general substrate transporter like domains 24 497 IPR036259 -
Lapu2g00655 498 ProSitePatterns Sugar transport proteins signature 1. 346 363 IPR005829 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00655 Lapu-Chr2 5740835 5742466 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00655 28 496 Organic Solute Cotransporters AT4G36670 50.426 1.17e-172 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00655 - - gmx:100813954 748.429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g00655 2 5740835 5742466 Lapu3g01637 3 21231652 21233911 PCT