Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00637 ATGGTTTCTCCTTATGCTTGTCTCAGTTCCTCCATGCTCAGCACACCTTCACCACTCTTTCTCACTCCCCTTTACCACACTCTCACAGTGCTTCCCAATACCACCAAACCACCTACCTCAAAACTCTCCTCTTCTTCTTTTCACTCTCTCTCACTCTCTGCTGTGCCCACTAAGATAGACACCACTGTGAGAATCGAGGAAATCAAAGATGTCTCAAACTTCGATTTCAAGGCCTACATGCTCCACAAGGCCCACACAATCAACCAAGCCTTGGACGCAGCCATTGCGCTGCGCGACCCAGAGAAGATCCACAAAGCCATGCGCTACTCCCTCCTTGCGGGCGGAAAAAGGGTCCGCCCAATCCTCTGCATCGCTGCCTGTGAGCTTGTGGGCGGCCACGAGGCCACCGCCATCCCTGCTGCCTGTGCTGTCGAGATGATCCACACCATGTCCCTCATCCACGATGATCTGCCATGCATGGACAACGATGACCTCCGCCGTGGCAAGCCCACCAACCACAAGGTCTTCGGCGAGGATGTGGCGGTCCTTGCTGGTGACGCACTGCTCGCTTTCGCGTTCGAGCATGTAGCGTTGGCCACTGAGGGCGTGTCGCCAACCAGCGTGGTTCGCGCAATTGGAGAGTTGGCGAAATCGATCGGCGGGGAAGGCCTTGTGGCGGGACAGGTGGTGGATTTAGATTCAGAGGGGGTCTCGAATGTGGGGCTGGAGAGGTTGGAATTCATTCATGTGCATAAAACGGCAGCTTTGCTGGAAGCTGCGGTTGTGTTGGGGGCAATAGTGGGAGGTGGATCGGACGAGGAGGTTGAGAAATTAAGAAAGTTCGCAAGATGCATTGGATTGTTGTTTCAGGTTGTTGATGACATTCTGGATGTAACTAAGTCATCTGAGGAACTGGGAAAGACTGCGGGGAAGGACTTGGTGGCTGATAAGGTCACCTACCCTAAACTTTTAGGGATACACAAGTCTAAGGAGTTTGCTGAAAAACTGCTGCAGGACGCAAAGGAACAGTTGTCTGTATTTGATCCCCAGAAGGCAGCTCCCTTGTTTGCTTTAACCAATTACATTGCTTACAGGCAAAGTTAA 1104 0.5245 MVSPYACLSSSMLSTPSPLFLTPLYHTLTVLPNTTKPPTSKLSSSSFHSLSLSAVPTKIDTTVRIEEIKDVSNFDFKAYMLHKAHTINQALDAAIALRDPEKIHKAMRYSLLAGGKRVRPILCIAACELVGGHEATAIPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHVALATEGVSPTSVVRAIGELAKSIGGEGLVAGQVVDLDSEGVSNVGLERLEFIHVHKTAALLEAAVVLGAIVGGGSDEEVEKLRKFARCIGLLFQVVDDILDVTKSSEELGKTAGKDLVADKVTYPKLLGIHKSKEFAEKLLQDAKEQLSVFDPQKAAPLFALTNYIAYRQS* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00637 367 FunFam Geranylgeranyl diphosphate synthase 73 367 - -
Lapu2g00637 367 SFLD Polyprenyl Transferase Like 79 365 - -
Lapu2g00637 367 CDD Trans_IPPS_HT 99 365 IPR000092 GO:0008299
Lapu2g00637 367 ProSitePatterns Polyprenyl synthases signature 2. 285 297 IPR033749 -
Lapu2g00637 367 ProSitePatterns Polyprenyl synthases signature 1. 152 168 IPR033749 -
Lapu2g00637 367 Gene3D Farnesyl Diphosphate Synthase 68 367 IPR008949 -
Lapu2g00637 367 SFLD Isoprenoid Synthase Type I 79 365 - -
Lapu2g00637 367 SUPERFAMILY Terpenoid synthases 77 347 IPR008949 -
Lapu2g00637 367 Pfam Polyprenyl synthetase 101 338 IPR000092 GO:0008299
Lapu2g00637 367 PANTHER FARNESYL DIPHOSPHATE SYNTHASE 48 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00637 Lapu-Chr2 5573709 5575046 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00637 K13789 - gmx:100778289 530.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g00637 2 5573709 5575046 Lapu2g00637 2 5573709 5575046 ECH
Lapu3g01624 3 20827366 20828974 Lapu2g00637 2 5573709 5575046 ECH
Lapu2g00637 2 5573709 5575046 Lapu3g01624 3 20827366 20828974 PCT