Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00632 ATGGCTTCTACTCATGCACCTAATTCCTCTGCATTAATACGTTTCTGTCTCATCCTTATCATTTCCACTCATGCCGCTGCCATCGCTCCTAATCAACAACAACAACACTTCAAACAAGCACCCAAATTCTACAACTCACCCAACTGTGCCGCCATTGGGCTGGAAACCACCGACAAGTGCTCGGATGAGGCAGTCCACGTCGCCATGACTCTGGACATCACCTACCTTCGGGGCTCCATGGCCGTCATCCTCTCCGTCCTCCAGCACTCCTCCTGTCCAGAAAACGTCATCTTCCACTTCGTCACCGCCGCCTCCAGGGCCTCCTCCTCCGCCCTCCTCAATCGCACCCTCTCCAACTCCTTCCCCTATCTCAATTTCCAAATCTACCCCTTCAACGACCGCCAAGTTGCCGGCCTCATCTCCACCTCCATCCGCTCCGCTCTCGACTGCCCCCTCAACTACGCCCGCAACTACCTCGCCAACCTCCTCCCCTCCTGCGTCCGCAAAATCGTCTACCTCGACTCCGACCTCGTCCTCGTCGACGACATCTCTAAACTCGCCGCCACGCCCCTCAGAGACAACAACAGCACCGTCCTCGCCGCTCCCGAATACTGTAACGCCAACTTCAGCGCCTACTTCACTCCCTCCTTCTGGTCCAACCCCTCTCTCTCCCTCACCTTCGCGGGCCGAAGGCCCTGCTACTTCAACACCGGCGTCATGGTCATTGATTTGCAACGCTGGCGAGCCGGCGACTACACTACGAAGATCCAGGAGTGGATGGAGCTCCAGAAGAGAATGCGGATCTACGAGCTGGGCTCCCTGCCGCCGTTTCTACTGGTTTTCGCTGGTAACATAGTCCCGGTGGATCACAGGTGGAACCAGCATGGGCTTGGCGGGGATAACTTCCGCGGCCTTTGCAGAGACTTGCATCCAGGCCCGGTGAGCCTCCTGCATTGGAGTGGGAAGGGAAAGCCCTGGGCCCGCCTCGACGCCAACCGCCCTTGCCCCTTGGATTCCTTATGGGCTCCCTATGATCTTCTCCAAACTCCCTTCTCCCTTGAAGCCTAG 1068 0.5777 MASTHAPNSSALIRFCLILIISTHAAAIAPNQQQQHFKQAPKFYNSPNCAAIGLETTDKCSDEAVHVAMTLDITYLRGSMAVILSVLQHSSCPENVIFHFVTAASRASSSALLNRTLSNSFPYLNFQIYPFNDRQVAGLISTSIRSALDCPLNYARNYLANLLPSCVRKIVYLDSDLVLVDDISKLAATPLRDNNSTVLAAPEYCNANFSAYFTPSFWSNPSLSLTFAGRRPCYFNTGVMVIDLQRWRAGDYTTKIQEWMELQKRMRIYELGSLPPFLLVFAGNIVPVDHRWNQHGLGGDNFRGLCRDLHPGPVSLLHWSGKGKPWARLDANRPCPLDSLWAPYDLLQTPFSLEA* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00632 355 FunFam Hexosyltransferase 66 335 - -
Lapu2g00632 355 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 66 336 IPR029044 -
Lapu2g00632 355 Pfam Glycosyl transferase family 8 66 328 IPR002495 GO:0016757
Lapu2g00632 355 SUPERFAMILY Nucleotide-diphospho-sugar transferases 65 346 IPR029044 -
Lapu2g00632 355 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 16 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00632 Lapu-Chr2 5535631 5537782 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00632 17 353 Glycosyltransferase AT3G50760 68.824 6.72e-176 490
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00632 K20893 - gmx:100783054 585.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g00632 2 5535631 5537782 Lapu2g00632 2 5535631 5537782 ECH
Lapu3g01620 3 20548529 20549581 Lapu2g00632 2 5535631 5537782 ECH
Lapu2g00632 2 5535631 5537782 Lapu3g01620 3 20548529 20549581 PCT