Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00631 ATGCCTCCCTCCTACTGCGTGAAGCAGAGTAAACCCTGCGTCGGTTGGGTTCAGACTTACTTCAACGATTGTCTCTGCGGTCTTAAAGATGAAATCTCCTTTGCCTTAGGCTTCATTAGTCTCATATGTTGGGGAGTAGCAGAAATTCCTCAGATTATCACCAACTTTCGCGCTAAGTCTAGCCATGGTGTCTCCCTAGCCTTTCTCCTCACTTGGGTTGCTGGCGACATATTCAATCTCGTTGGTTGTGTTCTGGAGCCAGCCACGCTTTACACAATCACTACGATCGTGCTAGTACTTCAAAGTTTCTATTACGACTATATCTATAAATGGAGCAAGCGATACCGAAAGATCAACATTGACGAGGCCCAGGAAGAAGAGGAAAAACCTTTGAGACCCAAACCAGGGTCCCAGTCTGGGATTGCAATACCAAATGACGAACCCAAACCAACGCCTCGACGGGAATACTACTACAGGTCAGCAAGATCTCTGGCTGCCAATGACACTCCACCGTTTGGTACCTACCTGAGAGCTGCTAAAAGTGTCCCTTCAGCCATGGAAATGAACAATGATTCTTCCTCTGATGATGAGCCACCTCCACTTTCTTCCACAAAGCCTGTAACTAAGCCTAGACCCATCCCTCGATCTGTCCCTGCAAGCTATGGAACATTTCTAGCAGCATCTATGAACTTGCCTCGGCAGGGTAATGCTTTGAAGGAGGGATACATAAGATTCAGTGGAAGAAAGCTACTCTTGCAGGAGCAAAGCACGCACAGTGCCTTGGGTCAATGGTTAGGATGGTTCATGGCTGTTATCTATATGGGTGGCAGGCTCCCTCAAATATGGTTGAATATTAAACGAGGGAGTGTGGAGGGCTTAAATCCTTTGATGTTCCTCTTTGCATTGATCGCCAATGCCACTTACGTTGGAAGTATTCTTGTAAGAACTACCGAATGGGAAAGCATCAGAGCTAATATGCCATGGCTGTTGGATGCCATAGGTTGCGTCGCATTGGACCTATTCATAATTTTGCAGTACGCCAACTATAGATACATTCGTAAGAAAGCAAGAAGTGATGATGGTGATTATGGGAACTACAAGGAAGCCAGCAAAACTTTTGTGTCTTGA 1128 0.4601 MPPSYCVKQSKPCVGWVQTYFNDCLCGLKDEISFALGFISLICWGVAEIPQIITNFRAKSSHGVSLAFLLTWVAGDIFNLVGCVLEPATLYTITTIVLVLQSFYYDYIYKWSKRYRKINIDEAQEEEEKPLRPKPGSQSGIAIPNDEPKPTPRREYYYRSARSLAANDTPPFGTYLRAAKSVPSAMEMNNDSSSDDEPPPLSSTKPVTKPRPIPRSVPASYGTFLAASMNLPRQGNALKEGYIRFSGRKLLLQEQSTHSALGQWLGWFMAVIYMGGRLPQIWLNIKRGSVEGLNPLMFLFALIANATYVGSILVRTTEWESIRANMPWLLDAIGCVALDLFIILQYANYRYIRKKARSDDGDYGNYKEASKTFVS* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00631 375 SMART ctns 46 77 IPR006603 -
Lapu2g00631 375 SMART ctns 275 306 IPR006603 -
Lapu2g00631 375 Gene3D - 262 363 - -
Lapu2g00631 375 Gene3D - 33 125 - -
Lapu2g00631 375 MobiDBLite consensus disorder prediction 184 215 - -
Lapu2g00631 375 FunFam Vacuolar membrane PQ loop repeat protein 261 359 - -
Lapu2g00631 375 MobiDBLite consensus disorder prediction 123 153 - -
Lapu2g00631 375 MobiDBLite consensus disorder prediction 185 201 - -
Lapu2g00631 375 Pfam PQ loop repeat 261 319 IPR006603 -
Lapu2g00631 375 Pfam PQ loop repeat 32 87 IPR006603 -
Lapu2g00631 375 PANTHER SEVEN TRANSMEMBRANE PROTEIN 1-RELATED 3 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00631 Lapu-Chr2 5525150 5529875 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00631 K23678 - gmx:100815310 646.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g00631 2 5525150 5529875 Lapu2g00631 2 5525150 5529875 ECH
Lapu2g00631 2 5525150 5529875 Lapu3g01619 3 20535795 20540611 PCT