Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00335 ATGGGGAGCCCCCTCTCCTCTGATTCCCAACTCCCTTGTTCTTCCTATTTTCCTGTACCCGATGGACCCCACTCTCCTGCAAAGCCTCCAAAACACATGATGAAGGAGTTGTTTCTCATCTCATGTGGCTTGCTGCTACTGCTGCTTCTGTCCTTGGTGGCCTTCAATGGCTACTGCCCATATTCAACCGGACACGGACATCGTGTGTCATTAACATTAACAACACCCGGTGAATTAGAATTGAGCCCTCACAAAGTACCACGCTCAACGTTGAAACCATCTTCACGTGGCGTGTCTTCAGGGGTGTCGGAGAAGTCTAGCTGGGTGTTGAAGACCAACAATGGAGACTCCTATCCTTGGAACAATAGCATGTTGTCATGGCAGAGAACCGCTTACCATTTCCAACCTGAGAAGAATTGGATGAACGTGTTGAATGTTAAGGATACTAACTTTTTTTCTTATCTCTGTGGTGTTACTATGGCTTACTCTCACGGGGAACCTGGATCAGATCCTAACGTTGTTGCAATTTGGGTACCAATTTCAGGTCCTATGTACTACAAAGGCTGGTATCACTTCTTCTACCAATACAATCCAAAGGGTGCAGTTTGGGGTGACATAGTTTGGGGGCACGCTGTATCAAGAGACTTAATCCACTGGCTTCACCTTCCACTGGCAATGGTGGCTGATCAATGGTATGACAAAAACGGTGTGTGGACTGGCTCTGCCACCATCTTACCCAATGATCAAGTCATCATGCTATACACGGGTTCAACCAACGAGTCAGTGCAAGTCCAAAACCTTGCATACCCTGCCGACCCCTCTGATCCTCTTCTTGTTGATTGGATCAAATACCCTTCAAATCCAGTTCTGTTCCCTCCACCAGGCATAGATACAAAGGATTTTCGTGACCCCACCACAGCTTGGCTCACCTCTGAAGGCAAGTGGCGCATCAGTATTGGTTCAAAGCTTAACAAAACTGGCATTGCCTTGGTTTATGATACCAATGACTTTAAGACCTATGAGCGTGTGGAGGGACTGCTCCATGCCGTGCCTGGCACTGGCATGTGGGAGTGTGTTGACTTCTTCCCAGTATCCAGCAAGGGTGAAAATGGCTTGGATACTTCAATCAATGGGGAGACTGTGAAGCATGTGGTAAAGGTTAGTTTGGATGATGATAGACATGATTACTATGCAGTGGGGACCTACGATCAGAAGAATGCTAAGTTCACACCAGATGACTTGAATAACGATGTTGGTATTGGACTCAGATATGACTATGGTATATTTTATGCATCCAAGACATTTTATGATCAGAGTAAGGGTAGGAGAGTTTTGTGGAGTTGGATTGGAGAGTCTGATAGCGAATATGCTGACGTGGCCAAAGGTTGGGCATCAGTTCAGGGTATTCCAAGAACAGTGACACTTGATAAGAAAACTGGCAGCAACTTACTTCAATGGCCTGTAGCAGAGGTAGAAAGTTTGAGATTGCGAAGCGATGAGTTTGAAAATTTGAAGGTGAAGCCAGGGTCAGTGGTGCCACTTGAAATTGGAACAGCTGCACAGTTGGACATTGTAGCTGAGTTTGAGATAGATAACAAAGCCTTGGAGATGGCTAGCCAGTCCAATAAGGAGTACGAGTGTAGCACCAGTGGTGGAGCAGCAGAACGTGGTGCCTTAGGACCATTTGGTCTTCTGGTTTTGGCTGATGACGATCTTTCTGAATACACTCCCACATACTTCTATGTAGTTAAAGGAAGCGATGGACAACTTAAAACATCCTTTTGCTCTGATCAATTAAGGTCATCTATAGCAACTGATGTTGGTAAGAAAATCTTTGGAAGCTTCGTTCCAGTACTAGAAGATGAAAAATTGTCTGTGAGGATATTGGTGGACCATTCTGTGGTGGAAAGCTTTGCTCAAGGTGGAAGGACATGCGTGACATCTCGAGTTTATCCAACGAAGGCAATCTATGGAGCTGCTAGATTGTTTTTGTTCAATAATGCTACTGATGTCACTGTGACTGCTTCAGTTAAAGTTTGGCAAATGAATTCTGCATTCATACGCCCCTTCAACCCACAACAAAGTAATTCAATTTAA 2097 0.4506 MGSPLSSDSQLPCSSYFPVPDGPHSPAKPPKHMMKELFLISCGLLLLLLLSLVAFNGYCPYSTGHGHRVSLTLTTPGELELSPHKVPRSTLKPSSRGVSSGVSEKSSWVLKTNNGDSYPWNNSMLSWQRTAYHFQPEKNWMNVLNVKDTNFFSYLCGVTMAYSHGEPGSDPNVVAIWVPISGPMYYKGWYHFFYQYNPKGAVWGDIVWGHAVSRDLIHWLHLPLAMVADQWYDKNGVWTGSATILPNDQVIMLYTGSTNESVQVQNLAYPADPSDPLLVDWIKYPSNPVLFPPPGIDTKDFRDPTTAWLTSEGKWRISIGSKLNKTGIALVYDTNDFKTYERVEGLLHAVPGTGMWECVDFFPVSSKGENGLDTSINGETVKHVVKVSLDDDRHDYYAVGTYDQKNAKFTPDDLNNDVGIGLRYDYGIFYASKTFYDQSKGRRVLWSWIGESDSEYADVAKGWASVQGIPRTVTLDKKTGSNLLQWPVAEVESLRLRSDEFENLKVKPGSVVPLEIGTAAQLDIVAEFEIDNKALEMASQSNKEYECSTSGGAAERGALGPFGLLVLADDDLSEYTPTYFYVVKGSDGQLKTSFCSDQLRSSIATDVGKKIFGSFVPVLEDEKLSVRILVDHSVVESFAQGGRTCVTSRVYPTKAIYGAARLFLFNNATDVTVTASVKVWQMNSAFIRPFNPQQSNSI* 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00335 698 CDD GH32_Fruct1-like 170 475 - -
Lapu2g00335 698 SUPERFAMILY Concanavalin A-like lectins/glucanases 487 686 IPR013320 -
Lapu2g00335 698 Pfam Glycosyl hydrolases family 32 N-terminal domain 181 487 IPR013148 -
Lapu2g00335 698 Gene3D - 499 682 - -
Lapu2g00335 698 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 176 499 - -
Lapu2g00335 698 MobiDBLite consensus disorder prediction 82 101 - -
Lapu2g00335 698 SMART glyco_32 133 642 IPR001362 GO:0004553|GO:0005975
Lapu2g00335 698 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 122 685 - -
Lapu2g00335 698 Gene3D Glycosyl hydrolase domain; family 43 179 498 IPR023296 -
Lapu2g00335 698 Pfam Beta-fructofuranosidase, N-terminal domain 15 125 IPR021792 GO:0004564
Lapu2g00335 698 Pfam Glycosyl hydrolases family 32 C terminal 490 681 IPR013189 -
Lapu2g00335 698 MobiDBLite consensus disorder prediction 1 28 - -
Lapu2g00335 698 SUPERFAMILY Arabinanase/levansucrase/invertase 126 488 IPR023296 -
Lapu2g00335 698 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 499 682 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00335 Lapu-Chr2 2750734 2754470 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00335 4 698 Glycoside Hydrolase AT1G12240 58.451 0.0 814
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00335 K01193 - gmx:100798772 1148.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g00335 2 2750734 2754470 Lapu2g00335 2 2750734 2754470 ECH
Lapu2g00335 2 2750734 2754470 Lapu3g01302 3 14226376 14231580 PCT