Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01974 ATGATGTTGCAGAAGAATGTGAACTATGGTTTTAATGGCTATAAAGGGCCTACCATTCCTAAAGCTTCAAGATCAATCAGGGGAAGGGGCACAATCAAGAAGAAACCTGAAAATAACCAAATACAAGCTTTTGAAATATTGGCTAATGTAGCTGGCAACTTTTTGCAAGAGAGTGAGAATTCCAGTCTTGACAATGTAGCATCTACAAAAGATCCTCACATTTTCCCTAGTGCTAACATAAAGCATAAGCTTCATGATGAAGGCGGACCATTTAAAGAGGATATATTTGAGCATGGAAATTGCAGTGAAATTGTCTCTGCTAGTGTCCCTAGTAAGCAAGGGAAACATGACAATCTTAGAGTTATGGACAACTCATCTTTTCCTGGCAATCATCTTGAGGGCCAAGGACAAAATATCCTTGAAAGGGAAGATGAAAGGGTCAAAAGAAGAAGAGTAAATGAGAAAAGCATCCACATTAAAGGCTGCTATGATGGGTTAATAGAACCAAGCTACAAAGTATCTAAAGATTGCAGTTCGGAAAATAATATGGCAAAGTCGTCATTGGAAGGCCATAGGCATCTTGATTCTTTCCCCAACACTTCCACTGGTAGGAAATTAGTTAGAGATGATGATGAAAACTTAGTTAACTGTACTCAACTAAACTCCAGGGATAAGATATCTACCACACCAGATACGCAAAAATTGAAATATGCAAGTCCTCTTATGAGTGATGAGAACAATAGTAGGGACAATTCTGAGATTGAAAATTTACAAAGGATGTATCCATTTAAGAAGAGGAAATTCTTCAACCAGACCTCATCATCCACTTCTGATAGGGGGTCTCAATGTCAAGGCATATTTGATTCTTCTGATACCACCAGGGTCAATGACACAAATCATGCAATTGAAGAATCATCCTCTATAGTTGGTCAACAGGTGCATTCTGGGTCCAAGGGTTGTAACGTGAAGCTCAGCATAAAATCCTTTAAAGTCCCAGAACTTTTCATTAATATACCTGAAACTGCAACTATCGGTTCATTGAAAAGGACAGTAATGGAGGCTGTGACAAGTATACTTGGAGATGAACTTCATGTAGGCATCCTTCTTCAGGGAAAGAAAGTCCGAGATGATAGCAAAACTCTAATCCAAACAGGAATATCTCAAGATGATAAACGTCATAGATTAGGATTCATGTTGGAGCCAAGACATAGTTCAAACTCTCCATCTTCATACAATGATAAACCTTGTTTTCTAACCACTGGTTCGCAACAAAAGTTATCCAAGCAACCAACATCCTTAATGTTACAACAAGGAACATACAATGTATCCCAAGAACGTTCTATGATCAAAATTGAAAGTTGTGTCGAGGGTGATCATAATGTGGTCTCCTCTCCAACAGATACTTATGCTAACAATAACATGTCAAAATGTCGCACTCTGGTGGCAGTTCCAGCGATTAACATGGAGGCATTAGCTGTGGTTCCATTTCGACGTAAATCTGGAAATCCTGACTTTTCACAACGCCGAATTAGAAGGCCATTCTCTGTTCTAGAAGTAGAAGCATTGGTTCAAGCTGTTGAAAAACTTGGAACTGGAAGGTGGCGTGACGTCAAACAACGTGCTTTTGACCATGCAAAACATCGAACTTACGTTGATTTGAAGGATAAGTGGAAGACATTAGTGCACACTGCTAGAATCTCACCTCAACAAAGAAGGGGAGAACCTGTTCCTCAGGAACTTTTGGATAGGGTCTTAGCTGCTCATGCCTATTGGTCTCAACAACAATGTAAGCATCAACTCAAACCATTATGA 1812 0.3935 MMLQKNVNYGFNGYKGPTIPKASRSIRGRGTIKKKPENNQIQAFEILANVAGNFLQESENSSLDNVASTKDPHIFPSANIKHKLHDEGGPFKEDIFEHGNCSEIVSASVPSKQGKHDNLRVMDNSSFPGNHLEGQGQNILEREDERVKRRRVNEKSIHIKGCYDGLIEPSYKVSKDCSSENNMAKSSLEGHRHLDSFPNTSTGRKLVRDDDENLVNCTQLNSRDKISTTPDTQKLKYASPLMSDENNSRDNSEIENLQRMYPFKKRKFFNQTSSSTSDRGSQCQGIFDSSDTTRVNDTNHAIEESSSIVGQQVHSGSKGCNVKLSIKSFKVPELFINIPETATIGSLKRTVMEAVTSILGDELHVGILLQGKKVRDDSKTLIQTGISQDDKRHRLGFMLEPRHSSNSPSSYNDKPCFLTTGSQQKLSKQPTSLMLQQGTYNVSQERSMIKIESCVEGDHNVVSSPTDTYANNNMSKCRTLVAVPAINMEALAVVPFRRKSGNPDFSQRRIRRPFSVLEVEALVQAVEKLGTGRWRDVKQRAFDHAKHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAYWSQQQCKHQLKPL* 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01974 603 CDD SANT_TRF 512 562 - -
Lapu1g01974 603 SUPERFAMILY Ubiquitin-like 317 412 IPR029071 -
Lapu1g01974 603 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 506 565 IPR017930 -
Lapu1g01974 603 SMART sant 510 563 IPR001005 -
Lapu1g01974 603 ProSiteProfiles Myb-like domain profile. 506 561 IPR001005 -
Lapu1g01974 603 SUPERFAMILY Homeodomain-like 512 593 IPR009057 -
Lapu1g01974 603 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 600 IPR031105 -
Lapu1g01974 603 Gene3D - 500 602 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01974 Lapu-Chr1 33196648 33200286 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01974 - - pvu:PHAVU_008G1030000 1010.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01974 1 33196648 33200286 Lapu1g01974 1 33196648 33200286 ECH
Lapu1g01974 1 33196648 33200286 Lapu5g00366 5 3039151 3044979 ECH