Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01902 ATGAAGCTTTTGGCGTTTTGGTCTGCACTGGCTTCTGCTCTTCTAGTTTTTTCCTTGGCCTCTGCTGCAACAGTAGAGCACACTTTCACTGTTCAAAACACAACTATCAAACGCCTGTGCAATGAGCGAGTGATTGTCACAGTGAATGGACTTTACCCTGGACCAAAGTTAGAAGTTCGAGAAGGGGACGCAGTGATTGTTCATGTAGTTAACAACTCACCCTACAATATCACTATTCACTGGCATGGAATATTTCAACTCTTTAGTGCATGGGCAGATGGTCCTGAATACATAACACAATGCACAATTCGTCCTCATCATAGTTATACTTATAGATTCAATGTGATACAACAAGAAGGAACAGTGTGGTGGCATGCTCATGCTGCAGTTTTACGTGCCACCGTTCATGGTGCTTTCATCATTCACCCTCGTTCCGGCAAGTTTCCATTTCCTAAACCCTACAAGCAAGTTCCAATAATATTAGGTGATTGGTACGACGGTAATGTGGTGGATATCTATAACCACGCACTCGCCGTTGGGGCTGTAAGAATATCCGATGCCTTCACCATCAATGGTTTGCCTGGTGATCTCTTCAACTGCTCAAAACAACAGACATTCAAGCTAAAGCTGAGACAAGGAAAAACCTACTTGCTAAGAATGATCAACGCTGCATTCAATAACAACCTTTTCTTCAAGATAGCCAACCACAAATTCACAGTGGTTGCCACGGACGCTTCATACATCGAACACTACGTCACTGACATCATCACCATAGCTCCTGGCCAAACCGCTGACGTGCTTCTGAAAGCGGACCAACCCATCGGTTCCTATTACATGGCAGCCTCTCCTTACGTTGTGGGCCAGCCCTCACCACTATTCGACAACACGACAACTCGAGGCATTGTCTTCTACGAAGGTTACACATCATCGTTAAAAGATTCAAAACCCATCATGCCAATACTTCCACCCTTCAACGCCACACCGATCGCCCACAAATTCTTCACCAACATCACGAGTCTGGTGGGAGCACCGCACTGGGTCCCGGTCCCACTTGAGGTGGACGAGCACATGCTCATCACCATTAGCATAAACCTTGAAAGGTGTCCCAAGAATGGCACGTGCCTAGGTTTGTTTCAACAGAAATTCTCTGCCAGCATGAACAACGAGTCTTTTGTGCATCCTGTGGGGAAAGGGTACTCTATGTTGGAGGCATCGTATTACAACGTGAGTGGTGTGTATACTACTGATTTTCCAAACTACCCTCCTGTAGCATTTGACTTCACAAGCCCCAAAAATGCTATGGATTTTAGCCGCATGTTTGCACCGAAATCGACCAAGGTGAAGAAGCTCAAGTTCAATTCAACCGTTGAGGTTGTGTTTCAAAACACAGCAATTTTGAATCCCCAAAGCCACCCCATGCACCTTCATGGTTTTAGTTTCCATGTTTTGGCTCAAGGGTTTGGGAACTATGATGCCACCAAAGATAGAGTCAAGTTTAATTTGGTGAATCCACAAATACGTAACACAATTGCTGTGCCAGCTGGAGGATGGGCTGTCATCAGATTCCAAGCAAACAATCCAGGGATGTGGTTTGTGCATTGCCATGTGGATGATCATATGCTATGGGGACTAGACATGGCTTTTGAGGTTGAGAGTGGACCAACTCCGTCAACTTCTCTACCACCACCACCAGCTGATCTACCCAAGTGTTAA 1713 0.4559 MKLLAFWSALASALLVFSLASAATVEHTFTVQNTTIKRLCNERVIVTVNGLYPGPKLEVREGDAVIVHVVNNSPYNITIHWHGIFQLFSAWADGPEYITQCTIRPHHSYTYRFNVIQQEGTVWWHAHAAVLRATVHGAFIIHPRSGKFPFPKPYKQVPIILGDWYDGNVVDIYNHALAVGAVRISDAFTINGLPGDLFNCSKQQTFKLKLRQGKTYLLRMINAAFNNNLFFKIANHKFTVVATDASYIEHYVTDIITIAPGQTADVLLKADQPIGSYYMAASPYVVGQPSPLFDNTTTRGIVFYEGYTSSLKDSKPIMPILPPFNATPIAHKFFTNITSLVGAPHWVPVPLEVDEHMLITISINLERCPKNGTCLGLFQQKFSASMNNESFVHPVGKGYSMLEASYYNVSGVYTTDFPNYPPVAFDFTSPKNAMDFSRMFAPKSTKVKKLKFNSTVEVVFQNTAILNPQSHPMHLHGFSFHVLAQGFGNYDATKDRVKFNLVNPQIRNTIAVPAGGWAVIRFQANNPGMWFVHCHVDDHMLWGLDMAFEVESGPTPSTSLPPPPADLPKC* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01902 570 ProSitePatterns Multicopper oxidases signature 2. 533 544 IPR002355 GO:0005507
Lapu1g01902 570 Pfam Multicopper oxidase 156 306 IPR001117 -
Lapu1g01902 570 SUPERFAMILY Cupredoxins 150 344 IPR008972 -
Lapu1g01902 570 Pfam Multicopper oxidase 31 145 IPR011707 GO:0005507
Lapu1g01902 570 SUPERFAMILY Cupredoxins 19 166 IPR008972 -
Lapu1g01902 570 Pfam Multicopper oxidase 418 551 IPR011706 GO:0005507|GO:0016491
Lapu1g01902 570 Gene3D - 155 343 IPR008972 -
Lapu1g01902 570 CDD CuRO_1_LCC_plant 27 143 IPR034288 GO:0005507
Lapu1g01902 570 PANTHER MULTI-COPPER OXIDASE 24 557 IPR045087 -
Lapu1g01902 570 Gene3D - 373 570 IPR008972 -
Lapu1g01902 570 CDD CuRO_2_LCC_plant 157 304 IPR034285 -
Lapu1g01902 570 CDD CuRO_3_LCC_plant 412 553 IPR034289 GO:0005507
Lapu1g01902 570 ProSitePatterns Multicopper oxidases signature 1. 528 548 IPR033138 -
Lapu1g01902 570 FunFam Laccase 154 343 - -
Lapu1g01902 570 SUPERFAMILY Cupredoxins 348 570 IPR008972 -
Lapu1g01902 570 NCBIfam laccase 23 570 IPR017761 GO:0046274|GO:0048046|GO:0052716
Lapu1g01902 570 Gene3D - 17 143 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01902 Lapu-Chr1 32232055 32236538 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01902 K05909 - gmx:100815453 952.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01902 1 32232055 32236538 Lapu10g01146 10 14100319 14104334 PCT