Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g01146 ATGGCTTCTCGTTTGGCTCCAATAATACTTCTCATGGCTTGCATTCTTCCAGCTTTGGTCCAGTGCAGAATCAGGCACTACAAATTTCATGTGGTGGCCAAACAAACCCCTAGATTGTGTTCAAGCAAATCTATTGTCACCATTAATGGGAAGTTCCCAGGACCCACTCTTTATGCCAGAGAAGATGACACAGTGCTGGTCAAAGTCATCAACCAAGTCAACCACAATGTAACCATCCATTGGCATGGTGTGAGGCAATTGAGAACTGGTTGGGCTGATGGACCTGCATATGTCACACAGTGCCCAATTCAACCAGGGCAAACCTATGTGTACAATTTCACCCTTACAGGGCAAAGAGGAACACTTCTTTATCATGCACATGTTAACTGGCTAAGGTCAACTCTCCATGGTGCCTTGGTTATCTTGCCAAAGAGAGGTGTGCCTTATCCTTTCCCAAAGCCAGATGATGAATTGGTTGTGGTATTAGGAGAATGGTGGAAATCTGACACTGAAGCTATTATCAATGAAGCACTCAAATCAGGATTGGCACCAAATGTCTCAGATGCTCATACCATTAATGGTCTTCCAGGGACAGTTACCAATTGTTCTTCACAGGATGTCTACAACCTACCCGTGGAGGGTGGAAAGACCTACCTGCTGAGAATTGTCAATGCTGCACTCAATGAGGAGCTCTTCTTCAAAATTGCAGGCCACAAGCTCACAGTGGTAGAAGTCGATGCCACATATGTAAAGCCTTTCAAGATTGAAACAATTGTGATAGCCCCTGGCCAAACCACCAATGTGCTTCTGAATGCTGACCAAAAATCTGGCAAGTACTTGGTTGCAGCTTCTCCTTTCATGGATGCTCCTGTTGCTGTGGACAACTTGACTGCCACAGCAACATTGCACTACACAGGCACGCTTGCCACCACCCCCACAGTTCTCACCACTCCACCTCCCAAAAATGCTACCCAAGTTGCTAACAACTTTCTTAACTCTCTTAGAGCCCTTAACTCCAAAAAGTACCCTGTCAATGTCCCACTAACGGTGGATCATTCACTTTTCTTCACTGTTGGGTTGGGGATTAACCCTTGCCCATCTTGCAAAGCTGCAAATGGGAGCAGGGTGGTGGCTTCTATCAATAATGTGACATTCCTTATGCCAACCACTGCCTTACTACAGGCACATTATTTCAACATCAAAGGGGTGTTCACCACTGATTTCCCTGCCAATCCACCCCATGTGTTCAACTACTCAGGGCCTGGACCAGCCAATTTGAACACCGTAACTGGCACAAAGGTTTACAAGCTACCATTCAATGCCACAGTTCAGGTTGTTCTACAAGACACTGGAATCATTGCACCTGAGAACCATCCAATCCATCTTCATGGCTTCAATTTCTTTATTGTTGGAAGAGGACTTGGTAACTACAATCCCAATACTGACCCAAAGAACTTTAACCTTGTTGATCCTGTTGAAAGGAACACAGTTGGAGTACCAGCTGGAGGATGGACTGCAATTAGATTCAGGGCAGATAATCCGGGAGTTTGGTTCATGCATTGCCACTTGGAGGTGCACACAACATGGGGACTAAAGATGGCCTTTTTGGTGGAGAATGGCAAAGGTCCCAAGCAATCAGTGATACCCCCACCAAAAGATCTTCCCAAATGCTAA 1674 0.457 MASRLAPIILLMACILPALVQCRIRHYKFHVVAKQTPRLCSSKSIVTINGKFPGPTLYAREDDTVLVKVINQVNHNVTIHWHGVRQLRTGWADGPAYVTQCPIQPGQTYVYNFTLTGQRGTLLYHAHVNWLRSTLHGALVILPKRGVPYPFPKPDDELVVVLGEWWKSDTEAIINEALKSGLAPNVSDAHTINGLPGTVTNCSSQDVYNLPVEGGKTYLLRIVNAALNEELFFKIAGHKLTVVEVDATYVKPFKIETIVIAPGQTTNVLLNADQKSGKYLVAASPFMDAPVAVDNLTATATLHYTGTLATTPTVLTTPPPKNATQVANNFLNSLRALNSKKYPVNVPLTVDHSLFFTVGLGINPCPSCKAANGSRVVASINNVTFLMPTTALLQAHYFNIKGVFTTDFPANPPHVFNYSGPGPANLNTVTGTKVYKLPFNATVQVVLQDTGIIAPENHPIHLHGFNFFIVGRGLGNYNPNTDPKNFNLVDPVERNTVGVPAGGWTAIRFRADNPGVWFMHCHLEVHTTWGLKMAFLVENGKGPKQSVIPPPKDLPKC* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g01146 557 SUPERFAMILY Cupredoxins 151 320 IPR008972 -
Lapu10g01146 557 Gene3D - 154 340 IPR008972 -
Lapu10g01146 557 CDD CuRO_3_LCC_plant 403 540 IPR034289 GO:0005507
Lapu10g01146 557 FunFam Laccase 13 143 - -
Lapu10g01146 557 NCBIfam laccase 22 557 IPR017761 GO:0046274|GO:0048046|GO:0052716
Lapu10g01146 557 CDD CuRO_2_LCC_plant 159 304 IPR034285 -
Lapu10g01146 557 PANTHER MULTI-COPPER OXIDASE 32 545 IPR045087 -
Lapu10g01146 557 Pfam Multicopper oxidase 157 306 IPR001117 -
Lapu10g01146 557 CDD CuRO_1_LCC_plant 27 143 IPR034288 GO:0005507
Lapu10g01146 557 ProSitePatterns Multicopper oxidases signature 1. 515 535 IPR033138 -
Lapu10g01146 557 FunFam Laccase 155 340 - -
Lapu10g01146 557 SUPERFAMILY Cupredoxins 24 172 IPR008972 -
Lapu10g01146 557 SUPERFAMILY Cupredoxins 347 557 IPR008972 -
Lapu10g01146 557 Pfam Multicopper oxidase 409 540 IPR011706 GO:0005507|GO:0016491
Lapu10g01146 557 Gene3D - 366 557 IPR008972 -
Lapu10g01146 557 Gene3D - 22 146 IPR008972 -
Lapu10g01146 557 ProSitePatterns Multicopper oxidases signature 2. 520 531 IPR002355 GO:0005507
Lapu10g01146 557 Pfam Multicopper oxidase 34 144 IPR011707 GO:0005507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g01146 Lapu-Chr10 14100319 14104334 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g01146 K05909 - gmx:100779825 1081.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01902 1 32232055 32236538 Lapu10g01146 10 14100319 14104334 PCT