Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01864 ATGAAAGCCACTGCAATCACTATAAATCCCTCACTTTCTCCACCCTTTTGTTCATCTGCCACTACCCCATCTTCTTCTTCCTCATCGTCTTTTACACAACCTGCTAGATTTCAACGTTTAAAGTCCTCAGGAGCAAAACCCATCACTCTTTCTTGCAGAGAAGCACGGTTGTACTCTTTGCAGGGGTTGAAATCTCTGAGTGATAGAAAAAGTTTTGTGCTTGAGGCTGCAAACATGGCAACGGCAGAGGTTGATTCTCACGGAGAAGGGGAGAACGAGGGTGCTTTGCTTGGCTCCGAGAACAATTCAAGGCCTCGGAGAATTGCTCTCTTTGTTGAACCTTCTCCCTTTGCATATGTCTCAGGATACAAAAACCGATTTCAAAACTTCATCAGATGCCTTCGTGAAATGGGAGATGAGGTGATGGTTGTGACTACACATGAGGGAGTGCCCCAGGAATTTTATGGAGCCAAATTAATTGGATCTTGGAGCTTTCCCTGCCCTTGGTATCAGAAGGTACCCCTCTCCTTGGCACTTAGTCCAAGAATAATTTCAGAGGTAGCCCGGTTTAAGCCTGACATAATTCATGCATCATCGCCAGGCATAATGGTTTTTGGAGCTCTTATCATTGCAAAACTACTGTGTGTTCCTATTGTCATGTCCTACCACACCCATGTACCTGTGTACATTCCAAGATATACCTTTAGCTGGTTGGTGAAACCCATGTGGTTGATCATAAAATTTCTTCACAGAGCAGCTGATCTGACTCTGGTTCCATCTGCTGCCATTGCTGGGGATCTCCTAGCAGCCAGGGTCACGGCAGCTAACAAGATTCGTCTTTGGAACAAGGGTGTTGATTCTGAAAAATTCCATCCCCAATACCGCTCCTATGAAATGCGATTAAGACTAAGCAATGGTGAACCTGAGAAACCCTTGATAGTTCATGTTGGACGGCTTGGAGTAGAGAAGAGTTTAGATTTTCTCAAAAGGCTCATGGATAGGCTTCCTGAAGCCCGAATTGCTTTCGTTGGTGACGGACCATACAGGGAGGAGCTAGAGAAAATGTTTGAAGGTATGCCCGCTGTGTTCACTGGAATGTTAGGAGGGGAAGACCTATCCCAAGCATATGCCAGTGGAGATGTGTTTGTCATGCCTTCAGAGTCAGAGACACTTGGTCTTGTAGTTTTGGAGGCCATGTCTTCAGGGATACCTGTGGTGGCGGCACGTGCTGGAGGTATTCCTGATATAATCCCTGCAGATCAAGACGGAAAAACTAGCTATCTGTATAATCCTGGAGATCTTGAAGATTGCTTGAGCAAACTAAGGCCACTTTTGCACAACAAAGTGTTGAGAGAAACCATTGGAAAAGCTGCACGTGAAGAGATGGAGAAGTATGATTGGAAGGCAGCCACACGAAAGATTCGCAATGAACAATACAATGCTGCCATTTGGTTCTGGCGCAAGAAAAGAGCTCAACTATTGAGACCCTTCCAATGGCTTGCAAGACGTTTTTTCCCATCACCACAAGTCAACTAA 1536 0.4538 MKATAITINPSLSPPFCSSATTPSSSSSSSFTQPARFQRLKSSGAKPITLSCREARLYSLQGLKSLSDRKSFVLEAANMATAEVDSHGEGENEGALLGSENNSRPRRIALFVEPSPFAYVSGYKNRFQNFIRCLREMGDEVMVVTTHEGVPQEFYGAKLIGSWSFPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLIIKFLHRAADLTLVPSAAIAGDLLAARVTAANKIRLWNKGVDSEKFHPQYRSYEMRLRLSNGEPEKPLIVHVGRLGVEKSLDFLKRLMDRLPEARIAFVGDGPYREELEKMFEGMPAVFTGMLGGEDLSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVAARAGGIPDIIPADQDGKTSYLYNPGDLEDCLSKLRPLLHNKVLRETIGKAAREEMEKYDWKAATRKIRNEQYNAAIWFWRKKRAQLLRPFQWLARRFFPSPQVN* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01864 511 CDD GT4-like 107 479 - -
Lapu1g01864 511 Pfam Glycosyl transferases group 1 311 447 - -
Lapu1g01864 511 Gene3D Glycogen Phosphorylase B; 312 470 - -
Lapu1g01864 511 Pfam Glycosyltransferase Family 4 125 288 IPR028098 -
Lapu1g01864 511 FunFam sulfoquinovosyl transferase SQD2 303 465 - -
Lapu1g01864 511 Gene3D Glycogen Phosphorylase B; 107 307 - -
Lapu1g01864 511 PANTHER SULFOQUINOVOSYL TRANSFERASE SQD2 103 490 - -
Lapu1g01864 511 FunFam Sulfoquinovosyl transferase SQD2 107 302 - -
Lapu1g01864 511 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 108 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01864 Lapu-Chr1 31796313 31800991 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01864 70 428 Glycosyltransferase AT5G01220 78.830 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01864 K06119 - gmx:100807850 899.427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01864 1 31796313 31800991 Lapu1g01864 1 31796313 31800991 ECH
Lapu1g01864 1 31796313 31800991 Lapu10g01143 10 13950564 13955589 PCT