Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01842 ATGCCTAATTCCATGTCCCACACAGAGGAGAGAGCCACACTCACATGGCGCAAAATCCCTCACCCTCCCAAATACGACGTCGTTCGCCCCCGCTTCCGTCACGCCACAGCCACCACCCACTCCCAATTCGCCTCCGTCTCCGTCGCCCAATCCAAACTGCACCACGACTTCATGCCCACGCCCTCCCAGCTACTCAAGCACCCCCTTGCTGCCTTCTCCGTCGTTCCCCGAGATGCCGCCCTTTTCTCTGCCGGAGCCATCGCGGGCGCCGCCGCCAAGACCGTCACTGCTCCGCTCGACCGCATCAAGCTCCTCATGCAGACTCATGGCGTGCGGGTTGGACAAGATAGTGCTAAGAAGGCAATGAGTTTCATTGAGGCCATAGCAGTTATAGGGAAAGAAGAAGGCATTCAAGGTTACTGGAAGGGCAACCTCCCCCAGGTGATTCGAGTAGTACCTTATAGTGCTGTCCAGCTTTTTGCTTATGAAATTTATAAGAAAATATTCAGGGGAGAGAATGGTGAGCTCTCTGTTGTGGGAAGACTTGCAGCAGGTGCTTTTGCTGGAATGACATCCACTTTTATAACTTACCCATTAGATGTTCTAAGATTGCGTTTAGCTGTTGAACCCGGTTATCGAACCATGTCAGAGGTTGCCTTGAGCATGCTAAGGGAGGAGGGATTTGCATCTTTCTATCGAGGCCTTGGGCCTTCTCTTATTGCAATAGCTCCTTATATTGCAGTAAATTTTTGTGTTTTTGACTTATTAAAGAAATCATTGCCTGAGAAATACCAAAAGAGAACTGAAACATCTATACTCACAGCCGTCCTTTCTGCATCTCTCGCCACACTTACATGCTATCCTCTGGACACTGTTCGACGACAAATGCAATTGAAGGGCACACCTTATAATACAGTATTAGATGCTTTTTCAGGTATTGTGGCACGAGATGGAATTGCTGGGTTGTATCGGGGATTTGTGCCCAATGCTCTAAAGTCCCTTCCTAACAGCAGCATCAAGCTTACCACATACGACATTGTTAAGCGCCTAATTGCTGCTAGTGAGAAAGAATTTCAATCAATTGCAGAGGAAAATCGCATCAAGCACAAGAACACAAACAATCAATGA 1128 0.4823 MPNSMSHTEERATLTWRKIPHPPKYDVVRPRFRHATATTHSQFASVSVAQSKLHHDFMPTPSQLLKHPLAAFSVVPRDAALFSAGAIAGAAAKTVTAPLDRIKLLMQTHGVRVGQDSAKKAMSFIEAIAVIGKEEGIQGYWKGNLPQVIRVVPYSAVQLFAYEIYKKIFRGENGELSVVGRLAAGAFAGMTSTFITYPLDVLRLRLAVEPGYRTMSEVALSMLREEGFASFYRGLGPSLIAIAPYIAVNFCVFDLLKKSLPEKYQKRTETSILTAVLSASLATLTCYPLDTVRRQMQLKGTPYNTVLDAFSGIVARDGIAGLYRGFVPNALKSLPNSSIKLTTYDIVKRLIAASEKEFQSIAEENRIKHKNTNNQ* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01842 375 Pfam Mitochondrial carrier protein 271 352 IPR018108 -
Lapu1g01842 375 Pfam Mitochondrial carrier protein 175 262 IPR018108 -
Lapu1g01842 375 Pfam Mitochondrial carrier protein 82 171 IPR018108 -
Lapu1g01842 375 PRINTS Mitochondrial carrier protein signature 94 108 IPR002067 GO:0055085
Lapu1g01842 375 PRINTS Mitochondrial carrier protein signature 232 250 IPR002067 GO:0055085
Lapu1g01842 375 PRINTS Mitochondrial carrier protein signature 275 297 IPR002067 GO:0055085
Lapu1g01842 375 PRINTS Mitochondrial carrier protein signature 81 94 IPR002067 GO:0055085
Lapu1g01842 375 PRINTS Mitochondrial carrier protein signature 143 163 IPR002067 GO:0055085
Lapu1g01842 375 PRINTS Mitochondrial carrier protein signature 191 209 IPR002067 GO:0055085
Lapu1g01842 375 SUPERFAMILY Mitochondrial carrier 80 346 IPR023395 -
Lapu1g01842 375 ProSiteProfiles Solute carrier (Solcar) repeat profile. 76 168 IPR018108 -
Lapu1g01842 375 PANTHER SOLUTE CARRIER FAMILY 25 63 351 - -
Lapu1g01842 375 FunFam Envelope ADP,ATP carrier protein 78 356 - -
Lapu1g01842 375 Gene3D Mitochondrial carrier domain 79 351 IPR023395 -
Lapu1g01842 375 ProSiteProfiles Solute carrier (Solcar) repeat profile. 176 259 IPR018108 -
Lapu1g01842 375 ProSiteProfiles Solute carrier (Solcar) repeat profile. 266 350 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01842 Lapu-Chr1 31508895 31512746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01842 43 368 Organic Solute Cotransporters AT5G01500 78.834 0.0 507
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01842 K14684 - gmx:100778912 639.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01842 1 31508895 31512746 Lapu1g01842 1 31508895 31512746 ECH
Lapu1g01842 1 31508895 31512746 Lapu10g01108 10 13373553 13378033 PCT