Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g01108 ATGGAAGCGCGCGTGGGGATGGTGATGGAAGGCGGACAGAGAACCCTCAACTCCGACGGCGTCGCCGCCAAGTTTCTGGCTCAGAACAGTCATCAACTTGGCACGCTGCATCAGCTTCTCGCCGGCGGCATCGCCGGCGCGTTTAGCAAAACCTGTACTGCCCCCCTTGCGCGCCTCACTATCCTCTTTCAGGTGCAAGGTATGCATTCTGAGGTGGCAGCTTTGAGAAATCCTAGTATATGGTGTGAGGCATCACGAATTATCAATGAAGAAGGATTTAGAGCATTTTGGAAAGGCAATATGGTGACCATTGCTCATCGTCTTCCTTATTCTTCTGTCAACTTCTATGCTTATGAACGCTACAAGAATCTATTACATTCACTGATGGGAGAGAATGTTAGGGGAAATTCTAGTGCAAACCTCCTTGTGCACTTTGTGGGTGGTGGTTTGGCAGGTATAACAGCTGCTTCTGCCACATATCCTTTGGATCTTGTGAGGACACGACTTGCAGCACAGAGAAGTACCATGTACTACCGAGGCATCTCACATGCTTTCAGTACCATCTGTAGAGATGAAGGTTTCTTGGGTCTGTATAAGGGGCTTGGAGCAACATTGTTGGGTGTTGGGCCCAGTATAGCTATTAGTTTTTCTGTTTATGAGTGGTTACGTTCTGTATGGCAATCACAAAGACCTGATGATTCTACTGCTGTGGTTGGTCTTGCTTGTGGCAGTCTGTCAGGAATTGCATCATCAACAGCAACATTTCCTTTGGATCTCGTTAGACGTAGGATGCAATTAGAGGGTGCTGGCGGTCGAGCACGTGTCTATAACACTGGCTTGTTTGGTGCATTTGGGCGCATAATTCAAACCGAAGGGTTACGAGGTTTGTACAGAGGAATTCTGCCTGAGTACTATAAGGTTGTTCCCAGTGTGGGCATTGTCTTCATGACTTATGAAACACTGAAAATGCTTTTATCAGGCATTCCTAGCTATTAG 996 0.4719 MEARVGMVMEGGQRTLNSDGVAAKFLAQNSHQLGTLHQLLAGGIAGAFSKTCTAPLARLTILFQVQGMHSEVAALRNPSIWCEASRIINEEGFRAFWKGNMVTIAHRLPYSSVNFYAYERYKNLLHSLMGENVRGNSSANLLVHFVGGGLAGITAASATYPLDLVRTRLAAQRSTMYYRGISHAFSTICRDEGFLGLYKGLGATLLGVGPSIAISFSVYEWLRSVWQSQRPDDSTAVVGLACGSLSGIASSTATFPLDLVRRRMQLEGAGGRARVYNTGLFGAFGRIIQTEGLRGLYRGILPEYYKVVPSVGIVFMTYETLKMLLSGIPSY* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g01108 331 Gene3D Mitochondrial carrier domain 28 327 IPR023395 -
Lapu10g01108 331 PRINTS Mitochondrial carrier protein signature 38 51 IPR002067 GO:0055085
Lapu10g01108 331 PRINTS Mitochondrial carrier protein signature 51 65 IPR002067 GO:0055085
Lapu10g01108 331 PRINTS Mitochondrial carrier protein signature 243 265 IPR002067 GO:0055085
Lapu10g01108 331 PRINTS Mitochondrial carrier protein signature 154 172 IPR002067 GO:0055085
Lapu10g01108 331 PRINTS Mitochondrial carrier protein signature 198 216 IPR002067 GO:0055085
Lapu10g01108 331 PRINTS Mitochondrial carrier protein signature 99 119 IPR002067 GO:0055085
Lapu10g01108 331 ProSiteProfiles Solute carrier (Solcar) repeat profile. 33 124 IPR018108 -
Lapu10g01108 331 ProSiteProfiles Solute carrier (Solcar) repeat profile. 234 324 IPR018108 -
Lapu10g01108 331 Pfam Mitochondrial carrier protein 235 326 IPR018108 -
Lapu10g01108 331 Pfam Mitochondrial carrier protein 140 227 IPR018108 -
Lapu10g01108 331 Pfam Mitochondrial carrier protein 33 126 IPR018108 -
Lapu10g01108 331 PANTHER SOLUTE CARRIER FAMILY 25 29 325 - -
Lapu10g01108 331 SUPERFAMILY Mitochondrial carrier 33 321 IPR023395 -
Lapu10g01108 331 ProSiteProfiles Solute carrier (Solcar) repeat profile. 139 225 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g01108 Lapu-Chr10 13373553 13378033 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g01108 28 330 Organic Solute Cotransporters AT3G55640 74.013 4.10e-160 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g01108 - K14684 gmx:100777563 601.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01842 1 31508895 31512746 Lapu10g01108 10 13373553 13378033 PCT