Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01771 ATGCAAAAACTCCATCTGGGTCATCCCCACTCTCCGTCAATGGATACTACACCCTCTTCCACACCTTTCCAAGACCTTACAGAAGCTTCTTCAAAGCCTTCAAAGAAGACTACATTTGCCTCTTTCATGACAGCCCCCTCCTTCAAAGAGGACACCTACTTCGTGTCCCACCTCAAACCCTCCGAGAAAAAGGCCCTCCAAGACCTCAGGGACAAACTCCTCGCCTCCTCGGACTCCTCGAACCCCCCTTCGATGTGGGGCGTGCCTCTGCTCGACGGCGGCGACAGAGGCAACGTGCTGCTCCTGAAGTTCCTCCGAGCGAGGGACTTCAGGGTCCACGATGCCCTTAACATGCTCCTCAAGTGCCTCGCGTGGAGGACCGAGTTCGGAGCTGATAACGTTGTGGAGGAGGAGCTGGGATTCAAGGAGCTCGAAGGGGTTGTGGCATACACTCACGGGTACGATAGAGAGGGGCACCCTGTGTGCTACAATGCCTATGGCGTGTTCAAGGATAAGGATATGTATGAGAGAGTGTTCGGGGATGAGGAAAAGCTGAAGAGGTTCTTAAGGTGGAGGGTTCAGGTCCTGGAGAGAGGGGTGAAGATGCTTCACTTCAAACCCGGTGGGGTCAACTCGCTCATTCAGGTCACTGACCTTAAGGACATGCCCAAGAGAGAACTCAGGGTCGCTTCTAACCAGATACTCTCTCTCTTCCAAGATAACTATCCTGAAATGGTAGCTCGCAAGATTTTCATCAATGTGCCATGGTACTTCAGCGTGTTGTATTCAATGTTCAGTCCGTTTCTGACCCAAAGAACCAAGAGCAAGTTTTTGATCTCTAAGGAGGGAAATGCTGCAGAGACACTCTACAAATTTATAAGGCCCGAGAATATTCCTGTTCGGTATGGTGGATTGAGTCGACCCGGCGATTTGGAGAATGGTCCCCCAAAACCTGCTTCTGAGTTCACAGTTAAAGGTGGAGAGAAAGTGAACATACAAATAGAAGGAATTGAGAGTGGTGCAACTATCACATGGGATATTGTGGTGGGAGGGTGGGACTTGGAATATAGTGCTGAATTTGTCCCAATTGCACAAGGTAGCTACACCTTAGCAGTTGATAAGGCAAGGAAGATTGAGGCCACAGAAGAAGCAATCCACAACTCTTTCACATCAAAAGAAACTGGCAAAATGGTACTCTCTGTTGATAACTCTGCCTCAAGGAAGAAAAAAGTTGCTGCTTATCGCTATTTTGTGCGCAAATGCAATAGCACACCATCTTCGGAGCTTCAATTAAGCCCCAAATAA 1305 0.4904 MQKLHLGHPHSPSMDTTPSSTPFQDLTEASSKPSKKTTFASFMTAPSFKEDTYFVSHLKPSEKKALQDLRDKLLASSDSSNPPSMWGVPLLDGGDRGNVLLLKFLRARDFRVHDALNMLLKCLAWRTEFGADNVVEEELGFKELEGVVAYTHGYDREGHPVCYNAYGVFKDKDMYERVFGDEEKLKRFLRWRVQVLERGVKMLHFKPGGVNSLIQVTDLKDMPKRELRVASNQILSLFQDNYPEMVARKIFINVPWYFSVLYSMFSPFLTQRTKSKFLISKEGNAAETLYKFIRPENIPVRYGGLSRPGDLENGPPKPASEFTVKGGEKVNIQIEGIESGATITWDIVVGGWDLEYSAEFVPIAQGSYTLAVDKARKIEATEEAIHNSFTSKETGKMVLSVDNSASRKKKVAAYRYFVRKCNSTPSSELQLSPK* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01771 434 ProSiteProfiles GOLD domain profile. 286 420 IPR009038 -
Lapu1g01771 434 SMART sec14_4 143 307 IPR001251 -
Lapu1g01771 434 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 136 310 IPR001251 -
Lapu1g01771 434 SUPERFAMILY CRAL/TRIO domain 142 307 IPR036865 -
Lapu1g01771 434 Gene3D - 55 128 - -
Lapu1g01771 434 Pfam CRAL/TRIO domain 145 304 IPR001251 -
Lapu1g01771 434 FunFam SEC14 cytosolic factor family protein 145 320 - -
Lapu1g01771 434 Gene3D GOLD domain 317 418 - -
Lapu1g01771 434 MobiDBLite consensus disorder prediction 1 36 - -
Lapu1g01771 434 MobiDBLite consensus disorder prediction 12 36 - -
Lapu1g01771 434 SMART CRAL_TRIO_N_2 97 122 IPR011074 -
Lapu1g01771 434 SUPERFAMILY CRAL/TRIO N-terminal domain 40 138 IPR036273 -
Lapu1g01771 434 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 321 423 IPR036598 -
Lapu1g01771 434 Pfam CRAL/TRIO, N-terminal domain 66 120 IPR011074 -
Lapu1g01771 434 PANTHER PATELLIN-1 28 420 IPR044834 GO:0008289
Lapu1g01771 434 Gene3D - 135 316 IPR036865 -
Lapu1g01771 434 CDD SEC14 141 305 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01771 Lapu-Chr1 30713729 30717343 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01771 101 299 Acyl Lipid Metabolism Gene Families AT1G55840 27.230 1.62e-13 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01771 - - gmx:100814996 735.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01771 1 30713729 30717343 Lapu1g01771 1 30713729 30717343 ECH
Lapu1g01771 1 30713729 30717343 Lapu10g01291 10 17549482 17552829 PCT