Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g01291 ATGATGGACACCGCTTCGTCCCCTTTGTCCCTCCAAAGCCAAAAGACAAGCTTCCAGGACCTACCAGAAGCTTCTCCCAAGCCTTACAAGAAGGGCTTTGTGGCCACCCTAATGGGAGGAGCCTCCACTACTCCTTTCAAAGAAGACAACTACTTTGTGTCCCTCCTCAGGTCCTCGGAGAAGAAAGCCCTTCAAGAGCTGAAGGACAAGCTCAAAGATTCCTTTGATGACTCTCCCCCTGATGCCTCCATGTGGGGCATTCCCCTCCTTGGAGGTGATGACAGAGCTGATGTTATTCTCCTGAAGTTTCTTAGGGCAAGGGACTTCAGGGTTGGTGATGCCCTCCACATGCTTCTAAAGTGTCTTGCTTGGAGGAAGGAGTTTGGTGCTGACACCATTTTGGAAGAGGATTTGGGGTTCAAGGAGCTTGAAGGAGTGATAGCATATATGCAAGGGTATGACAAGGATGGGCACCCTGTGTGCTACAATGCTTATGGTGTGTTTAAGGACAAGGAAATGTACGAGAGGGTCTTTGGTGACGAGGAGAAGCTGAAAAAGTTCCTCAGGTGGAGGGTTCAGGTCCTTGAGAGAGGAATCAAGGTTCTTCATTTCAAGCCTGGTGGAGTCAATTCTCTCATTCAGGTCACAGACCTGAAGGACATGCCCAAGAGAGAGCTGAGGGTGGCTTCCAACCAGATCCTCTCCTTGTTCCAAGATAACTACCCGGAAATGGTGGCTCGCAAGATTTTTATAAACGTCCCATGGTACTTCAGCATGCTGTATTCAATGTTCAGTCCGTTTCTGACTCAGAGAACCAAGAGCAAGTTTGTGATCTCTAAGGAAGGAAATGCTGCAGAGACACTCTACAAATTTATTAGGCCTGAGGATATTCCTGTTCAGTATGGAGGACTGAATCGGCCCAGTGATTTGCCGAATGGTCCCCCAAAACCTGCATCTGAGTTCACAATCAAAGGAGGGGAGAAAGTGAACATACAAATTGAAGGAATTGAGGCTGGTGCAACAATCACATGGGACATTGTGGTAGGAGGGTGGGACTTGGAATACAGTGCTGAATTTGTGCCAAATGCTGAAGGAAGCTACACCATAGCTGTTGAAAAGCCGAGGAAAATGGGAGCCTCAGAAGAAGCAATCCACAATTCATTCACATCAAAAGAATCTGGAAAGATGGTACTCTCAGTTGATAACACTGCCTCAAGGAGGAAAAAGGTTGCTGCTTATCGCTATGTTGTCCGCAAAAACAGCACCATTTAA 1272 0.4733 MMDTASSPLSLQSQKTSFQDLPEASPKPYKKGFVATLMGGASTTPFKEDNYFVSLLRSSEKKALQELKDKLKDSFDDSPPDASMWGIPLLGGDDRADVILLKFLRARDFRVGDALHMLLKCLAWRKEFGADTILEEDLGFKELEGVIAYMQGYDKDGHPVCYNAYGVFKDKEMYERVFGDEEKLKKFLRWRVQVLERGIKVLHFKPGGVNSLIQVTDLKDMPKRELRVASNQILSLFQDNYPEMVARKIFINVPWYFSMLYSMFSPFLTQRTKSKFVISKEGNAAETLYKFIRPEDIPVQYGGLNRPSDLPNGPPKPASEFTIKGGEKVNIQIEGIEAGATITWDIVVGGWDLEYSAEFVPNAEGSYTIAVEKPRKMGASEEAIHNSFTSKESGKMVLSVDNTASRRKKVAAYRYVVRKNSTI* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g01291 423 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 320 418 IPR036598 -
Lapu10g01291 423 Pfam CRAL/TRIO, N-terminal domain 63 119 IPR011074 -
Lapu10g01291 423 SUPERFAMILY CRAL/TRIO domain 141 306 IPR036865 -
Lapu10g01291 423 CDD SEC14 140 304 IPR001251 -
Lapu10g01291 423 Gene3D - 54 127 - -
Lapu10g01291 423 FunFam SEC14 cytosolic factor family protein 52 127 - -
Lapu10g01291 423 PANTHER PATELLIN-1 43 419 IPR044834 GO:0008289
Lapu10g01291 423 MobiDBLite consensus disorder prediction 1 21 - -
Lapu10g01291 423 SUPERFAMILY CRAL/TRIO N-terminal domain 58 137 IPR036273 -
Lapu10g01291 423 ProSiteProfiles GOLD domain profile. 285 419 IPR009038 -
Lapu10g01291 423 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 135 309 IPR001251 -
Lapu10g01291 423 Pfam CRAL/TRIO domain 144 303 IPR001251 -
Lapu10g01291 423 Gene3D - 131 315 IPR036865 -
Lapu10g01291 423 FunFam SEC14 cytosolic factor family protein 144 319 - -
Lapu10g01291 423 Gene3D GOLD domain 316 417 - -
Lapu10g01291 423 SMART CRAL_TRIO_N_2 96 121 IPR011074 -
Lapu10g01291 423 SMART sec14_4 142 306 IPR001251 -
Lapu10g01291 423 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g01291 Lapu-Chr10 17549482 17552829 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g01291 100 298 Acyl Lipid Metabolism Gene Families AT1G55840 27.230 8.09e-13 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g01291 - - gmx:100809944 793.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01771 1 30713729 30717343 Lapu10g01291 10 17549482 17552829 PCT