Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01740 CAGCCACAACAAAACAGCAGAATACCATACATACACATTGTAGTGGCACCTTTCACTTTTGTCTCCGAACTAGTTCGCTTGAGAAATATAATAGCACTATTTGCAACTATGGCTAGCGTGAAGGTAGCATGCATGGTTGTGATGTGCATGGCTGTGGTGGGTGCACCAATGATGGTGCAGGCCATTTCATGCAACGATGTGACAACGTACATGGCACCGTGCCTATCTTACCTGATAAATGGTGGAACGGTTTCTGATGCGTGCTGTGGAGGAGTTAGGAGCATTCTGGGTGCTGCTGGAACAACCTCTGAAAAACAAACCGTGTGCAACTGTCTTAAGGAAGCTGCTAATAACTTTGGCATCAGTGATGATTACGCGCAGGCACTCCCTGGTCTCTGCAATGTCAACGTCTCTTACAAGATCAGCCGCTCCACCAACTGTGCAAACATCAGGTTCTAA 459 0.4706 QPQQNSRIPYIHIVVAPFTFVSELVRLRNIIALFATMASVKVACMVVMCMAVVGAPMMVQAISCNDVTTYMAPCLSYLINGGTVSDACCGGVRSILGAAGTTSEKQTVCNCLKEAANNFGISDDYAQALPGLCNVNVSYKISRSTNCANIRF* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01740 152 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 2-RELATED 41 148 IPR000528 GO:0006869|GO:0008289
Lapu1g01740 152 SMART aai_6 64 147 IPR016140 -
Lapu1g01740 152 ProSitePatterns Plant lipid transfer proteins signature. 129 150 IPR000528 GO:0006869|GO:0008289
Lapu1g01740 152 Pfam Protease inhibitor/seed storage/LTP family 64 147 IPR016140 -
Lapu1g01740 152 Gene3D - 61 152 IPR036312 -
Lapu1g01740 152 CDD nsLTP1 62 147 - -
Lapu1g01740 152 PRINTS Plant phospholipid transfer protein signature 104 119 IPR000528 GO:0006869|GO:0008289
Lapu1g01740 152 PRINTS Plant phospholipid transfer protein signature 120 137 IPR000528 GO:0006869|GO:0008289
Lapu1g01740 152 PRINTS Plant phospholipid transfer protein signature 83 97 IPR000528 GO:0006869|GO:0008289
Lapu1g01740 152 PRINTS Plant phospholipid transfer protein signature 63 79 IPR000528 GO:0006869|GO:0008289
Lapu1g01740 152 PRINTS Plant phospholipid transfer protein signature 138 149 IPR000528 GO:0006869|GO:0008289
Lapu1g01740 152 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 62 149 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01740 Lapu-Chr1 30349902 30351436 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01740 37 151 Acyl Lipid Metabolism Gene Families AT2G38540 40.678 1.09e-24 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01740 - - pvu:PHAVU_008G087100g 196.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01740 1 30349902 30351436 Lapu10g01361 10 20183219 20184954 PCT